DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and p4htmb

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:339 Identity:64/339 - (18%)
Similarity:119/339 - (35%) Gaps:104/339 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 LLRKDIYEVGKIDVPDPTFIITPWFDVTGC---LRVGQ-----TSQHLSCHYEKNTSEFLRIAPL 307
            |:...::|:..:.:....|.|..:.....|   :|:.|     .||.:....::...:.|.::|.
Zfish   140 LVSGKVHEMKTLSLKPLLFEIPDFLSEEECAVVVRLAQLKGLMESQVMVPEGQEELDQQLNLSPE 204

  Fly   308 KV-------ETLSLKPHIVLYHDVIYDSEISKVKNIS--LPSLKSPL--RILYAIDYNLKFAKIR 361
            ::       :...|:||.:|.|..:.|......:|:.  ...||:.|  ..|.:::   :|.::|
Zfish   205 EIFNFLDLNQDGQLQPHEILTHSRVRDGIWLTSENLKEIYDGLKADLDGNGLLSLE---EFGRLR 266

  Fly   362 ED-------------------------------HQSPLSLR-----IKDMTGEDVQEDTDFQIDN 390
            .|                               ||....||     :..:....|:.....|:..
Zfish   267 SDAFQRFLLQRGVERSQLVRNSRHTWLYQGQGAHQVLQDLRKRVTLLTRLPSSLVELSEPLQVVR 331

  Fly   391 YGICGFRNFHTDNIELQDQTA--------------ELGDRLTSIMFFMNDVAQGGALAFP----- 436
            |...|..:.|.|:..:..:||              :...|..:::|::|:|.:||...||     
Zfish   332 YEQGGHYHAHHDSGPVYPETACTHTRLAANTTSPFQTSCRYITVLFYLNNVQEGGETTFPVADNR 396

  Fly   437 ----------------------NLNLTIWPQKGSALVWRNL--DHR---MQPNQDLLHVSCPVVV 474
                                  ..||.:.|.||:|:.|.|.  |.|   .:.::..||..|.|..
Zfish   397 TYEEASLIQNDVDLLDTRKHCDKGNLRVKPVKGTAVFWYNYLSDGRGWVGEQDEYSLHGGCVVTQ 461

  Fly   475 GSKWTLVKWLHERP 488
            |:||....|::..|
Zfish   462 GTKWVANNWINVDP 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433
P4Hc <371..485 CDD:214780 35/164 (21%)
p4htmbXP_001340234.2 FRQ1 <204..271 CDD:444056 14/69 (20%)
P4Hc 285..471 CDD:214780 37/185 (20%)
Blue background indicates that the domain is not in the aligned region.

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