DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and P4htm

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_083220.3 Gene:P4htm / 74443 MGIID:1921693 Length:503 Species:Mus musculus


Alignment Length:172 Identity:38/172 - (22%)
Similarity:61/172 - (35%) Gaps:60/172 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 LRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNIELQDQTA--------------ELGDRLTSI 420
            ||:..::.|.|:.....|:..||..|..:.|.|:..:..:|.              |...|..::
Mouse   299 LRLTRLSPEIVEFSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTV 363

  Fly   421 MFFMNDVAQGGALAFP---------------------------NLNLTIWPQKGSALVWRNL--- 455
            :|::|:|..||...||                           ..||.:.||:|:|:.|.|.   
Mouse   364 LFYLNNVTGGGETVFPVADNRTYDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPD 428

  Fly   456 ---------DHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERP 488
                     |:.       ||..|.|..|:||....|::..|
Mouse   429 GQGWVGEVDDYS-------LHGGCLVTRGTKWIANNWINVDP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528
P4Hc <371..485 CDD:214780 36/166 (22%)
P4htmNP_083220.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..110
EF-hand_7 193..253 CDD:290234
EFh 195..253 CDD:298682
P4Hc 247..459 CDD:214780 36/166 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839362
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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