DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and Y43F8B.19

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001123044.2 Gene:Y43F8B.19 / 6418801 WormBaseID:WBGene00077688 Length:243 Species:Caenorhabditis elegans


Alignment Length:224 Identity:52/224 - (23%)
Similarity:88/224 - (39%) Gaps:32/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 QHLSCHYEKNTSEFLR-IAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLKSPLRILYAI 351
            :|..|.      |:|: ...:|||.::.:|.:|:|.|:....::.....: :..||...:::...
 Worm     8 KHAVCF------EYLQNFQIVKVEVVAWRPGLVIYRDLFTGKQVRDHLEL-MEHLKFEEQLVVND 65

  Fly   352 DYNLKFAKIR---------EDHQSPLSLRIKDMTGEDVQEDTDFQID------NYGICGFRNFHT 401
            |.|...:|||         |||  |.:..|.| |.:::..:.:|:..      :|...|....|.
 Worm    66 DGNDIVSKIRRANGTQVFHEDH--PAARSIWD-TAKNLLPNLNFKTAEDILALSYNPGGHYAAHH 127

  Fly   402 DNI------ELQDQTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLDHRMQ 460
            |.:      |..:.....|:|..:::........|||..||.|...:..:.|.|..|.|.....:
 Worm   128 DYLLYPSEKEWDEWMRVNGNRFGTLIMAFGAAESGGATVFPRLGAAVRTKPGDAFFWFNAMGNSE 192

  Fly   461 PNQDLLHVSCPVVVGSKWTLVKWLHERPQ 489
            ......|..||:..|.|.....||..|.|
 Worm   193 QEDLSEHAGCPIYKGQKQISTIWLRMRDQ 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528
P4Hc <371..485 CDD:214780 27/125 (22%)
Y43F8B.19NP_001123044.2 P4Hc 43..217 CDD:214780 38/177 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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