DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and p4ha1a

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_073773811.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:603 Species:Danio rerio


Alignment Length:559 Identity:152/559 - (27%)
Similarity:254/559 - (45%) Gaps:88/559 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIILSICLISLGPPIGLCEITNSA-----MSIAGMKELVDLEGFFISEMESYTAALKNKIDLME 60
            |..:.|:|...|   |.|.: ::||     .||..|.:|:..|...::.::.|..|.::|::.::
Zfish    63 MMGVRSVCCFLL---ISLLK-SSSAHSDFFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVK 123

  Fly    61 SLLQEVQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQ 125
            ...:::.:....:.::||.|:.||:|||.|::||:.:|.:.|.|:|..:....:..: |...:..
Zfish   124 QWAEKLDALTATAVQDPEGFLGHPVNAFKLMKRLNTEWGEVEDLVLKDMSDGFISNL-TIQRQYF 187

  Fly   126 PSDNDLNDAIGGIISLQQFYNLQPSDIANGLL----MGQQYNASLTTLNCQALANACMNFNYDKY 186
            |:|.|.|.|...::.||..|.|....|::|.|    .|..|.::||..:|..|.....: :.|.|
Zfish   188 PNDEDQNGAAKALLRLQDTYKLDTQTISSGDLPGVNTGLPYKSTLTVEDCFELGKIAYS-DADYY 251

  Fly   187 ALN-WFKAAVDHYNDDRDGQV-YREVFDFRLPDLY--------INYTSVLVT------------K 229
            ... |...|:...::..:..| .....|:....:|        :.||..|:|            |
Zfish   252 HTELWMAQALKQLDEGEESSVEIATALDYLSYSVYQQGELERALEYTKRLLTVEPEHQRALGNLK 316

  Fly   230 GF---------------RKAAWKVLQDVADLDATLWLLRKDIYEV---GKIDVPDPTFIITPWFD 276
            .|               .|...|..|:.:| ....:|..|..||.   |:               
Zfish   317 YFDYQLAKQKKAEKEQSTKEESKKEQETSD-GKKEYLPEKRKYEKLCRGE--------------- 365

  Fly   277 VTGCLRVGQTSQHLSCHY-EKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPS 340
              |.....:..:||.|.| ..|...|..|.|:|.|....:|.|:.||::|.:.||.|:|.:|.|.
Zfish   366 --GLRMTPRRQKHLFCRYFNGNRHPFYTIGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPR 428

  Fly   341 LK-----SPLR-ILYAIDYNLKFAKIREDHQSP----LSLRIKDMTGEDVQEDTDFQIDNYGICG 395
            |:     :|:. :|....|.:..:.....::.|    ::.||:|:||.:|:...:.|:.|||:.|
Zfish   429 LRRATISNPITGVLETAHYRISKSAWLAAYEHPVVDRINQRIEDITGLNVKTAEELQVANYGVGG 493

  Fly   396 FRNFHTD--NIELQDQTAEL--GDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLD 456
            ....|.|  ..:..|...||  |:|:.:.:|:|:|||.|||..||.:...:.|.||:|:.|.||.
Zfish   494 QYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVAAGGATVFPEVGAAVKPLKGTAVFWYNLF 558

  Fly   457 HRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495
            ...:.:....|.:|||:||:||...||:|||.|.|.|||
Zfish   559 PSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433 36/135 (27%)
P4Hc <371..485 CDD:214780 45/117 (38%)
p4ha1aXP_073773811.1 None

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