DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and PH4alphaEFB

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:550 Identity:164/550 - (29%)
Similarity:266/550 - (48%) Gaps:72/550 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIILSICLISLGPPIGLCEITNSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQE 65
            :.::|.|.|:..||..|  |:..   ::|.|:||::.|...|:.:|.|....::|::.:::.:.|
  Fly     7 LMLLLGILLLVGGPANG--EVYT---ALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDE 66

  Fly    66 VQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQ-PSDN 129
            .|.:...:..:...:|::|:||:.|.:||..||.|.|.||.:.||.:.||.|.......: |||.
  Fly    67 YQREHSDASHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDE 131

  Fly   130 DLNDAIGGIISLQQFYNLQPSDIANGLLMGQQYNASLTTLNCQALANACMNFNYDKY-ALNWFKA 193
            |||.|...::.||..|.|..|.:|.|.|.|.||:..:::.:|..|..... .|:|.| .:.|...
  Fly   132 DLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSY-VNHDYYHTVLWMNE 195

  Fly   194 AVDHYNDDRDGQVYREVFDFRLPDL--YINYTSVLVTKGFRKAAWKVLQDVADL-------DATL 249
            |:....::......    .|...|:  |:.:::  ..:|..::|..:..::..|       :...
  Fly   196 AMARMLEEPTNHTQ----SFTKADILEYLAFST--YKEGNIESALTMTNELLQLLPHHERANGNK 254

  Fly   250 WLLRKDIY---------------EVGKIDVP----DPTFIITPWFDVT----------GCLRVGQ 285
            ....|:|.               |:.|.|:|    ||..     ||:|          |.|:...
  Fly   255 RFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAI-----FDMTERRAYEMLCRGELKPSP 314

  Fly   286 TS-QHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLK------S 343
            :. :.|.|.|..|...|||:.|||:|.:...|:||:|||.:|||||..:|.::.|..:      |
  Fly   315 SDLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNS 379

  Fly   344 PLRILYAIDYNLK---FAKIREDHQ-SPLSLRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNI 404
            ....|...:|.:.   :.|.:||.. ..:..|..||||.|:....:.|:.||||.|....|.|..
  Fly   380 VTGALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFA 444

  Fly   405 ELQDQTA----ELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLDHRMQPNQDL 465
            ..::|.|    .||:|:.:::|:|:||.||||..|.:|:..::|:||:|..|.||....|.:...
  Fly   445 RKEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRT 509

  Fly   466 LHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495
            .|.:|||:.|:||...||:|||.|.|.|||
  Fly   510 RHAACPVLTGTKWVSNKWIHERGQEFRRPC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433 44/132 (33%)
P4Hc <371..485 CDD:214780 46/117 (39%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..161 CDD:462433 44/132 (33%)
P4Hc 356..529 CDD:214780 59/172 (34%)

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