DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and CG11828

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster


Alignment Length:503 Identity:138/503 - (27%)
Similarity:229/503 - (45%) Gaps:85/503 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLIRRLH 95
            |..|:.:|...|..|..|...|::|::.|.:..:|..::|.:...:|..:||:||.:|.|:||.:
  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65

  Fly    96 EDWTQAELLMLNQVGLEHLQAIETGLEEAQP--------------SDNDLNDAIGGIISLQQFYN 146
            .|..               :.:|...||.:|              ||.:|..|:.|::..|..|.
  Fly    66 TDVP---------------KLLELAREEFKPGPFQKFIDYDLSSISDVELETAVTGMLRFQGVYG 115

  Fly   147 LQPSDIANGLLMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRD-------- 203
            :..|::|||.|.|:|||:.::..:|.|:|....|.:..|.|..|||.|:|.|.:..|        
  Fly   116 MDESEMANGKLHGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAIDQYEEKLDPVNRLLQT 180

  Fly   204 --GQVYREVFDFRLPDLYINYTSVLVTKGFRKAAWKVL--QDVADLDATLWLLRKDIYEVGKIDV 264
              .|:|.::                   |....|...|  ...|..|:..|..::|..::.| .:
  Fly   181 GRSQIYEKL-------------------GLTLLAMHDLPASQAAFRDSIGWASKEDNTDLAK-HL 225

  Fly   265 PDPTFIITPWFDVTGC--LRVGQTSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYD 327
            .|.  :...:..|..|  ..:..:..:|.|.|.::.|.|||:||:|:|.|:::|.:.|:||.|..
  Fly   226 KDK--LAHMFVHVDNCRGKNLLPSKSYLRCRYLRDGSPFLRMAPVKLEQLNIEPFVGLFHDAISP 288

  Fly   328 SEISKVKNISLPSL----KSPLRILYAIDYNLKFAKIREDHQSPLSLRIKDMTGEDVQEDTDFQI 388
            :|...:.:::...|    |....:...:|.|      ..||...:..||:|:||.|::|.....:
  Fly   289 AEQKDLLHLTDSRLEHRKKDSSSVEAKVDTN------ASDHVRRIHQRIEDITGFDLEESEPLTV 347

  Fly   389 DNYGICGFRNFHTDNIELQDQTAE-LG-----DRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKG 447
            .||||.|....|.|    .:|..| :|     .|..|.||:::||..||..:||:|.....|::|
  Fly   348 SNYGIGGQDFIHLD----CEQPKEFIGYYPKEYRSASAMFYLSDVQMGGYASFPDLGFGFKPRRG 408

  Fly   448 SALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495
            |||||.|.|:....:...|..:|||::|::|...||:....|...:.|
  Fly   409 SALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 36/139 (26%)
P4Hc <371..485 CDD:214780 45/119 (38%)
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 36/139 (26%)
P4Hc 287..445 CDD:214780 51/167 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461939
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
87.900

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