DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18234 and CG32199

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster


Alignment Length:513 Identity:148/513 - (28%)
Similarity:268/513 - (52%) Gaps:55/513 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLI 91
            |:..|.:|:::|....:.::.|...:::|:||::.....::.....:....||:|::|||||.::
  Fly     6 SVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAFPML 70

  Fly    92 RRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIANGL 156
            |||::||.:....:...:..:.::.:|..|:.| |.|:||..|:.|:..:::|:||...|:..|:
  Fly    71 RRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSA-PIDDDLKVALKGMTRIEKFHNLHAEDLTKGV 134

  Fly   157 LMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLPDLYIN 221
            |||::.|:.||..:|.||.:...|......:.:|::.|:..:...| |.:|.:|...:...:|..
  Fly   135 LMGKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTHPR-GMIYAKVLGLKRKRIYKK 198

  Fly   222 YTSVLVTKGF----------RKAAWKVL------QDVAD-----LDATLWLLRKDIYEVGKIDVP 265
            |...|:.:..          .|:.|..|      :|..|     :|..|....|...||......
  Fly   199 YAKALLKESLNSDKSKPTPTEKSEWNRLAKEVTREDNYDNVKKLIDEYLSGDEKIFQEVAARLKR 263

  Fly   266 DPTFIITPWFDVTGCLRVGQ----TSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIY 326
            .||.:      ..||.  |:    :|..|.|.|.::||.||::||||:|.||::|.|:|||||:|
  Fly   264 KPTKL------ERGCR--GEWPKKSSPELICRYNRDTSAFLKLAPLKLEFLSVQPMILLYHDVLY 320

  Fly   327 DSEISKVKNISLPSLKSPLRILYAIDYNLKFAKIREDH----------QSPLSL----RIKDMTG 377
            ::|...:::|::.: .|.:.....:|::.|....::|.          .:|.:|    |:.||:|
  Fly   321 ENEFKSMRDIAMYN-GSMIDGWTYVDFDKKGNPKQQDRVVKMIAFQGTTAPFTLSINRRMADMSG 384

  Fly   378 EDVQEDTDFQIDNYGICGFRNFHTDNIELQDQTAEL-----GDRLTSIMFFMNDVAQGGALAFPN 437
            .:::::....:.|||:.|....|.|.:||..:..:.     |||:.:.:.:.:|:..||...|..
  Fly   385 LEMRDNMVLYLTNYGLGGHFGKHVDYVELAKRPPDFFADFGGDRIATALIYASDIPLGGTTVFTK 449

  Fly   438 LNLTIWPQKGSALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495
            |.:.:.|:|||||:|.||:|..:|:....|..||||:||:|.:.||:|||.|:|.:||
  Fly   450 LKIAVQPKKGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIISKWIHERQQVFKKPC 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 35/129 (27%)
P4Hc <371..485 CDD:214780 41/118 (35%)
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 35/129 (27%)
P4Hc <369..497 CDD:214780 43/127 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461990
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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