DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18234 and CG18233

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster


Alignment Length:500 Identity:163/500 - (32%)
Similarity:258/500 - (51%) Gaps:54/500 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLI 91
            |:.|:.:|:.:|..|:.....|...|:.|:|.:...|..::.....:....|:||::|||||.||
  Fly    34 SVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREKFVSNPLNAFGLI 98

  Fly    92 RRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIANGL 156
            |||::||.:.:......:|||.|.|:: .:..|.|...|:|:.:..:..::..|:|||.|||.||
  Fly    99 RRLNQDWPKLQNYTQKPLGLEQLTAMQ-DIVSAAPESFDMNEKLKAMHRIETTYDLQPKDIAKGL 162

  Fly   157 LMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLPDLYIN 221
            |...::|..|...:|.|||.........|.:|.||:.|:   ....||.:  |:.: ||.::.: 
  Fly   163 LQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEAL---KLSTDGSL--EIMN-RLKEIEL- 220

  Fly   222 YTSVLVTKGFRKAAWK-------------VLQDVAD---LDATLWLLRKDIYEVGKIDVPDPTFI 270
                   |||..|..|             .:.|:|:   .||.|..|.:.|....|..:.|.:  
  Fly   221 -------KGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSELKQWINDDS-- 276

  Fly   271 ITPWFDVT-GCLRVGQTSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVK 334
            .||..|.. ||..:.....:|.|.|..:|:.||::||||:|.:|..|:||::|:||.|.:|.::|
  Fly   277 TTPPTDHNLGCRGLFPKKSNLVCRYNSSTNAFLKLAPLKMEEISRDPYIVMFHEVISDKDIEEMK 341

  Fly   335 N---------ISLPSLKSPLRILYAIDYNLKFAKIREDHQSPLSLRIKDMTGEDVQEDTDFQIDN 390
            .         .||...|..:..:|.|.....|:|       .::.||.||||..::|....|:.|
  Fly   342 GEITEMENGWTSLGDPKEIVSRVYWIRKESSFSK-------RINQRISDMTGFKLEEFPAIQLAN 399

  Fly   391 YGICGF----RNFHTDNIELQDQTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALV 451
            :|:.|:    .:|:||.::..|....||||:.||:|:..:|:|||...||:|.:.:.|:||:||.
  Fly   400 FGVGGYFKPHYDFYTDRLKEVDVNNTLGDRIGSIIFYAGEVSQGGQTVFPDLKVAVEPKKGNALF 464

  Fly   452 WRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCT 496
            |.|......|:...||..|||:|||:||:.||||..||:|.:||:
  Fly   465 WFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPCS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 42/129 (33%)
P4Hc <371..485 CDD:214780 49/117 (42%)
CG18233NP_649044.3 P4Ha_N 34..163 CDD:285528 42/129 (33%)
ATP-synt_B <198..278 CDD:304375 20/95 (21%)
P4Hc 333..498 CDD:214780 59/171 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461934
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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