DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and CG34041

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster


Alignment Length:365 Identity:78/365 - (21%)
Similarity:162/365 - (44%) Gaps:69/365 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FIIL-SICLISLGPPIGLCEITNS----AMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMES 61
            ||:: |.|::|:|..|.....:||    ::|.:.:..::.::...:..:|:|..||:.|:..::.
  Fly   230 FIVMKSACILSVGLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDE 294

  Fly    62 LLQEVQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQP 126
            .|.::.:......|:.....:.|:.::|||..:..|||..:|.:....|.:.|.:: ..:::..|
  Fly   295 ALIDLATYHIQFERDKLAIASSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASL-MSIKKYLP 358

  Fly   127 SDNDLNDAIGGIISLQQFYNLQPSDIANGLLMGQQ------------------YNASLTTL-NCQ 172
            :.||:::...||..:...|.:...|||||:::|.|                  .|..|.:| :|.
  Fly   359 TKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDCV 423

  Fly   173 ALANACMNF-NYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLP--DLYINYTSVLVTKGFRKA 234
            ||::..|.. :|:| :..|...|:...    :...|   :|..:|  |||:....|.|    ::.
  Fly   424 ALSDHSMEMKDYNK-SKEWLNVAISML----ESSAY---WDPIVPSADLYLKLAEVYV----KQQ 476

  Fly   235 AWKVLQDVADL-------DATLWLLRKDI-YEV-------GKIDVPDPTFIITPWFDVTGCLRVG 284
            .|.:..:..:.       :|.|..::|.: |.:       .|:::.:..:.:             
  Fly   477 NWTLALETVEFALKSNPRNAQLIRMQKRLSYHILLGPPKSPKLNIENNDYRL------------- 528

  Fly   285 QTSQHLSCHYEKNTSEFLR-IAPLKVETLSLKPHIVLYHD 323
            :.:..|.|.|:.....|.. :||:|.|.|.:.|.::|||:
  Fly   529 RKNGSLYCFYDTKIRTFYSLLAPIKAEVLFIDPLVILYHE 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433 29/131 (22%)
P4Hc <371..485 CDD:214780
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:462433
P4Ha_N 260..391 CDD:462433 29/131 (22%)
LapB <435..>505 CDD:442196 16/81 (20%)
TPR repeat 452..491 CDD:276809 9/45 (20%)
Blue background indicates that the domain is not in the aligned region.

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