DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and CG34041

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001034077.5 Gene:CG34041 / 3885583 FlyBaseID:FBgn0054041 Length:568 Species:Drosophila melanogaster


Alignment Length:365 Identity:78/365 - (21%)
Similarity:162/365 - (44%) Gaps:69/365 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FIIL-SICLISLGPPIGLCEITNS----AMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMES 61
            ||:: |.|::|:|..|.....:||    ::|.:.:..::.::...:..:|:|..||:.|:..::.
  Fly   230 FIVMKSACILSVGLIIVYLSYSNSENRHSLSKSKVINILKIQENVVKYLENYIYALETKLKTIDE 294

  Fly    62 LLQEVQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQP 126
            .|.::.:......|:.....:.|:.::|||..:..|||..:|.:....|.:.|.:: ..:::..|
  Fly   295 ALIDLATYHIQFERDKLAIASSPVASYSLIHHMQSDWTHWQLFLQEDPGKDELASL-MSIKKYLP 358

  Fly   127 SDNDLNDAIGGIISLQQFYNLQPSDIANGLLMGQQ------------------YNASLTTL-NCQ 172
            :.||:::...||..:...|.:...|||||:::|.|                  .|..|.:| :|.
  Fly   359 TKNDISEVCHGISKMLNAYLMTAQDIANGVILGTQTKYISSALKLEYLYMEIICNRHLMSLRDCV 423

  Fly   173 ALANACMNF-NYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLP--DLYINYTSVLVTKGFRKA 234
            ||::..|.. :|:| :..|...|:...    :...|   :|..:|  |||:....|.|    ::.
  Fly   424 ALSDHSMEMKDYNK-SKEWLNVAISML----ESSAY---WDPIVPSADLYLKLAEVYV----KQQ 476

  Fly   235 AWKVLQDVADL-------DATLWLLRKDI-YEV-------GKIDVPDPTFIITPWFDVTGCLRVG 284
            .|.:..:..:.       :|.|..::|.: |.:       .|:::.:..:.:             
  Fly   477 NWTLALETVEFALKSNPRNAQLIRMQKRLSYHILLGPPKSPKLNIENNDYRL------------- 528

  Fly   285 QTSQHLSCHYEKNTSEFLR-IAPLKVETLSLKPHIVLYHD 323
            :.:..|.|.|:.....|.. :||:|.|.|.:.|.::|||:
  Fly   529 RKNGSLYCFYDTKIRTFYSLLAPIKAEVLFIDPLVILYHE 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 29/129 (22%)
P4Hc <371..485 CDD:214780
CG34041NP_001034077.5 P4Ha_N 29..138 CDD:285528
P4Ha_N 260..389 CDD:285528 29/129 (22%)
TPR repeat 452..491 CDD:276809 9/45 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461991
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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