DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and PH4alphaNE3

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster


Alignment Length:479 Identity:142/479 - (29%)
Similarity:234/479 - (48%) Gaps:50/479 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 ELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLIRRLHED 97
            :|:.|:...|..:.:|...:..|...::.|.||::.....::...||::.:||::|.|||.:::|
  Fly    26 DLMQLDVELIDNLMNYAEKIDEKASQLKRLAQELRQPLHSAKGREEEYLGNPLHSFPLIRHMYQD 90

  Fly    98 WTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIANGLLMGQQY 162
            |...|..|...||.|.:|.:...|.|. |...|..:|...|..:.:.|.:.|.|:||||:...::
  Fly    91 WRYLEEFMKKPVGEEEIQFLRRKLPEL-PWQVDTEEASVSIFRIAETYGMMPWDMANGLIDNVRF 154

  Fly   163 NASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLPDLYINYTSVLV 227
            |::|..|:|..:|.....:.|.|.||.|...:.....::..| || ||......|:.:.....||
  Fly   155 NSTLPALDCFEVAKMYFKWGYFKQALQWITISKARMKEEYSG-VY-EVLGMNRQDVALLQARCLV 217

  Fly   228 TKGFRKAAWKVLQDVADL-DATLWLLRKDIYEVGKIDVPDPTFIITPWFDVTGCLRVGQ------ 285
            ....|..|.:||.|..|| |.::.||.:              |...|:..:....::|:      
  Fly   218 ELDRRDEAHEVLLDQPDLADNSISLLDQ--------------FKANPYEAIDSSPKLGEGYKRLC 268

  Fly   286 ------TSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLKSP 344
                  ....|.|.|...||.||.:||||:|.:||:||||:|||::.|.:|.::..::.|.|| |
  Fly   269 RSSFSPNPSKLHCRYNSTTSAFLILAPLKMEEISLEPHIVVYHDILPDKDIQQLITLAEPLLK-P 332

  Fly   345 LRILYAIDYNLKFAKIREDHQSP--------LSLRIKDMTGEDVQEDTDFQIDNYGI-CGFRNFH 400
            ..:   .|.|...|  |..:::|        |:.|::|:||..:::.....|..||. ..:.|::
  Fly   333 TEM---FDDNKNEA--RSSYRTPLGGPLLDSLTQRMRDITGLQIRQGNPINIIKYGFGAPYTNYY 392

  Fly   401 TDNIELQDQTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLD---HRMQPN 462
            ....:...::...|||:.:.||::||...|||..||.||:.:..::|..|.|.||:   |.|:|.
  Fly   393 DFFKKRNSESKGFGDRMATFMFYLNDAPYGGATVFPRLNVKVPAERGKVLFWYNLNGDTHDMEPT 457

  Fly   463 QDLLHVSCPVVVGSKWTLVKWLHE 486
              .:|.:|||..||||.:..|:||
  Fly   458 --TMHAACPVFHGSKWVMTAWIHE 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 36/123 (29%)
P4Hc <371..485 CDD:214780 39/117 (33%)
PH4alphaNE3NP_651814.1 P4Ha_N 25..149 CDD:285528 36/123 (29%)
P4Hc 316..478 CDD:214780 51/169 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461942
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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