DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and PH4alphaSG1

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster


Alignment Length:562 Identity:149/562 - (26%)
Similarity:247/562 - (43%) Gaps:111/562 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IILSICLISLGPPIGLCEITNSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQ 67
            ||||  |:.:.|..|     :...:|:.::.|:|:|.|.:.:.:.|....:.:.:.::..|.::.
  Fly     6 IILS--LLCVFPVNG-----DYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQID 63

  Fly    68 SKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQV-GLEHLQAIETGLEEA------- 124
            .::. .|.:.||:..:|:|||..|:||..||   :..:.:.| ...:.:..:..|.::       
  Fly    64 EQQN-DRGDLEEYFGNPINAFITIKRLVHDW---KFNVFDPVFDSSNFETYKNNLSDSLEKINFK 124

  Fly   125 QPSDNDLNDAIGGIISLQQFYNLQPSDIANGLLMGQQYNA---SLTTLNCQALA-NACMNFNYDK 185
            .|:..||:.|...::.||..|.|....:|:|:|...:.||   ||:..:|..|. |.|....| .
  Fly   125 GPTQEDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEY-S 188

  Fly   186 YALNWFKAAVDHYNDDRDGQVYREVFDFRLPDLYINYTSVLVTKGFRKAAWKVLQDVADL--DAT 248
            |...|...|....:....|.:...|.|..:.:   :.:|.....|..|.|:|:..::.|.  |..
  Fly   189 YGSEWLLEARKRLHGKPLGFISPNVSDVEILE---HLSSAFNGLGNLKLAYKLNNEILDKKPDHE 250

  Fly   249 LWLLRKDIYEVG------------KIDVPDPTFIITPWFDVTGCLRVGQTSQ------------- 288
            ..|..|.:|| |            ::::|                ::.:..|             
  Fly   251 EALKNKILYE-GQLARERSFAPRKQVELP----------------QIAEKEQKESYKLYTQVCRG 298

  Fly   289 --HLSCHYEKNTS--------EFLRIAPLKVETLSLKPHIVLYHDVIYDSEI------------- 330
              |.|...::|..        .:.|::|.|:|.|::.|::...|:|::||||             
  Fly   299 ELHQSPREQRNLRCWLYHQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHGKGNMER 363

  Fly   331 SKVKNISLPSLKSPLRI-----LYAIDYNLKFAKIREDHQSPLSLRIKDMTGEDVQEDTDFQIDN 390
            |||.. |..|..|.:||     |: .|.|...:||::        |::|:||...:.....|:.|
  Fly   364 SKVGQ-SENSTTSEVRISRNTWLW-YDANPWLSKIKQ--------RLEDVTGLSTESAEPLQLVN 418

  Fly   391 YGICGFRNFHTDNIELQDQT--AELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWR 453
            |||.|....|.|.:|...|:  :..|:||.:.:|::||||.|||.|||.|.|.:.|.|||.|:|.
  Fly   419 YGIGGQYEPHFDFVEDDGQSVFSWKGNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWY 483

  Fly   454 NLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495
            ||......:....|..|||:.||||...:|.|...|.|.|||
  Fly   484 NLHSSTHKDFRTKHAGCPVLQGSKWICNEWFHVGAQEFRRPC 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433 32/139 (23%)
P4Hc <371..485 CDD:214780 47/115 (41%)
PH4alphaSG1NP_733376.1 P4Ha_N 23..159 CDD:462433 32/139 (23%)
P4Hc 347..515 CDD:214780 64/177 (36%)

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