DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and P4ha3

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:559 Identity:142/559 - (25%)
Similarity:229/559 - (40%) Gaps:125/559 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ITNSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPL 85
            :|:.|.::|..:.|:.....::...|:....|....|.:.||.::::..           |.:||
Mouse    32 LTSVARALAPERRLLGTLRRYLRGEEARLRDLTRFYDKVLSLHEDLKIP-----------VVNPL 85

  Fly    86 NAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQ---PSDNDLNDAIGGIISLQQFYNL 147
            .||:||:||..||..   ::.:....|:::|::.|.|:.:   |:..||..|...::.||..|.|
Mouse    86 LAFTLIKRLQSDWRN---VVHSLEATENIRALKDGYEKVEQDLPAFEDLEGAARALMRLQDVYML 147

  Fly   148 QPSDIANGL-----------LMGQQYNASLTTLNC-QALANAC----MNFNYDK----YALNWFK 192
            ....:|.|:           |...:...|||..:| |....:|    :...||.    :|:.|.:
Mouse   148 NVKGLARGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKPSCGSRSLQVAYDTGDYYHAIPWLE 212

  Fly   193 AAVDHYN------DDRDGQVYREVFDF-----------------------------RLPDLYINY 222
            .||..:.      ...|.....:..|:                             |:....:.|
Mouse   213 EAVSLFRRAHGEWKTEDEASLEDALDYLAFACFQVGNVSCALSLSREFLVYSPDNKRMARNVLKY 277

  Fly   223 TSVLVTKGFRKAAWKVLQ--DVADLDATLWLLRKDIYEVGKIDVPDPTFIITPWFDVTG-CLRVG 284
            ..:|...|.:.||...:|  :|..|..      :|.||                    | |..:|
Mouse   278 ERLLAENGHQMAAETAIQRPNVPHLQT------RDTYE--------------------GLCQTLG 316

  Fly   285 QTSQH-----LSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLKSP 344
            ....|     |.|.||.|:|.:|.:.|.:.|.:.|:|.|.||||.:.|.|..|::.::.|.|:  
Mouse   317 SQPTHYQIPSLYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQ-- 379

  Fly   345 LRILYA-------IDYNLKFAKIREDHQSP----LSLRIKDMTGEDVQED--TDFQIDNYGICGF 396
             |.:.|       ::|.:..:...:|...|    |..||..:||.|:|..  ...|:.||||.|.
Mouse   380 -RSVVASGEKQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGH 443

  Fly   397 RNFHTDNIELQDQ---TAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLDHR 458
            ...|.|:......   ..:.|:|:.:.|.:::.|..|||.||...|.::...|.:||.|.||...
Mouse   444 YEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRS 508

  Fly   459 MQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCTT 497
            .:.:.|.||..|||:||.||...||:||..|.|.|||:|
Mouse   509 GEGDGDTLHAGCPVLVGDKWVANKWIHEYGQEFRRPCST 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 32/143 (22%)
P4Hc <371..485 CDD:214780 42/118 (36%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 34/138 (25%)
P4Hc 363..535 CDD:214780 53/174 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839334
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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