DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18234 and P4ha2

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_006532515.1 Gene:P4ha2 / 18452 MGIID:894286 Length:557 Species:Mus musculus


Alignment Length:546 Identity:150/546 - (27%)
Similarity:244/546 - (44%) Gaps:95/546 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLI 91
            ||..|.:|:..|...:..::.|....:.|:..::|...::::....|..:||.::|||:||:.|:
Mouse    28 SIGHMTDLIYAEKDLVQSLKEYILVEEAKLAKIKSWASKMEALTSRSAADPEGYLAHPVNAYKLV 92

  Fly    92 RRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIANGL 156
            :||:.||.....|:|.......:..:.. ..:..|:|.|.:.|...::.||..|.|.|..|:.|.
Mouse    93 KRLNTDWPALGDLVLQDASAGFVANLSV-QRQFFPTDEDESGAARALMRLQDTYKLDPDTISRGE 156

  Fly   157 LMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRDGQVYRE-VFD------FR 214
            |.|.:|.|.|:..:|..|..:..|.....:.:.|.:..:...:...:..|.:. |.|      |:
Mouse   157 LPGTKYQAMLSVDDCFGLGRSAYNEGDYYHTVLWMEQVLKQLDAGEEATVTKSLVLDYLSYAVFQ 221

  Fly   215 LPDLY--INYTSVLVT--------KGFRKAAWKVLQDVA------DLDATLWLLRKDIYEVGKID 263
            |.||:  :..|..|::        .|..:...::|::..      ..||.| ..::::||     
Mouse   222 LGDLHRAVELTRRLLSLDPSHERAGGNLRYFERLLEEERGKSLSNQTDAGL-ATQENLYE----- 280

  Fly   264 VPDPTFIITPWFDVTGCLRVGQ-------TSQHLSCHYEK-NTSEFLRIAPLKVETLSLKPHIVL 320
              .||..: |..||...|..|:       ..:.|.|.|.. |....|.|||.|.|.....||||.
Mouse   281 --RPTDYL-PERDVYESLCRGEGVKLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVR 342

  Fly   321 YHDVIYDSEISKVKNISLPSL-KSPLR-----ILYAIDYNLKFAKIREDHQSP----LSLRIKDM 375
            |:||:.|.||.::|.|:.|.| ::.:|     :|....|.:..:...|:...|    ::.|::.:
Mouse   343 YYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHI 407

  Fly   376 TGEDVQEDTDFQIDNYGICG--------------------------FRNFHTDNIELQDQTAEL- 413
            ||..|:.....|:.|||:.|                          |.|:..:    ||....| 
Mouse   408 TGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSGLKTEGNRLATFLNYSDE----QDAFKRLG 468

  Fly   414 -GDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNL------DHRMQPNQDLLHVSCP 471
             |:|:.:.:.:|:||..|||..||:|...|||:||:|:.|.||      |:|.:      |.:||
Mouse   469 TGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTR------HAACP 527

  Fly   472 VVVGSKWTLVKWLHERPQMFSRPCTT 497
            |:||.||...||.|||.|.|.|||.|
Mouse   528 VLVGCKWVSNKWFHERGQEFLRPCGT 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 34/129 (26%)
P4Hc <371..485 CDD:214780 46/147 (31%)
P4ha2XP_006532515.1 P4Ha_N 28..157 CDD:369820 34/129 (26%)
P4Hc 348..541 CDD:214780 58/202 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.