DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18234 and C14E2.4

DIOPT Version :10

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001359861.1 Gene:C14E2.4 / 182616 WormBaseID:WBGene00015773 Length:311 Species:Caenorhabditis elegans


Alignment Length:253 Identity:59/253 - (23%)
Similarity:97/253 - (38%) Gaps:45/253 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 TPWFDVTGCLRVGQTSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISK---- 332
            |.|          |:|:.:...|.:...|      :::|.||..|.:|:|.||....::|.    
 Worm    62 TTW----------QSSESICIRYVQQFYE------VRMEILSWSPPLVIYRDVFSKKQVSDYLEL 110

  Fly   333 VKNISLPS---LKSPLRILYAIDYNLKFAKIREDHQSPLSLRIKDMTGEDVQEDTDFQID----- 389
            :||:.:..   ::....|.|: .|......|...|....:..:.| |...:....|||..     
 Worm   111 LKNLKMNEQKVVRDDGEIAYS-TYRQANGTITPAHSHAEAQSLMD-TATQLLPVFDFQYTEQISA 173

  Fly   390 -NYGICGFRNFHTD-----NIELQDQ-TAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKG 447
             :|...|....|||     |.|..:: ..|:|:||.:.:.......:||...||.|........|
 Worm   174 LSYIKGGHYALHTDFLTFANAEDSNRHFGEMGNRLATFIMVFKKAEKGGGTLFPQLGNVFRANPG 238

  Fly   448 SALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPC----TTGRKF 501
            .|.:|.|.:..::.....||..||:..|.|.....|:    ::|::|.    .||..|
 Worm   239 DAFLWFNCNGNLEREAKSLHGGCPIRAGEKIIATIWI----RIFNQPIREMQETGGSF 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..159 CDD:462433
P4Hc <371..485 CDD:214780 32/125 (26%)
C14E2.4NP_001359861.1 P4Hc 100..276 CDD:214780 40/181 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.