DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and phy-2

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:542 Identity:143/542 - (26%)
Similarity:248/542 - (45%) Gaps:71/542 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIILSICLISLGPPIGLCEITNSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQE 65
            |..:|.:||::     ||.. .:...:||.::.::..|....:.::.|..|.:.::|.:.....|
 Worm     1 MRAVLLVCLLA-----GLAH-ADLFTAIADLQHMLGAEKDVTTIIDQYIEAERARLDDLRRYAHE 59

  Fly    66 VQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQ---PS 127
            ...:...:.....|||.:|:||:.||:||..:|.:.|.:|||......|:.|......::   |.
 Worm    60 YVHRNAHAESVGPEFVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRSEVKFPG 124

  Fly   128 DNDLNDAIGGIISLQQFYNLQPSDIANGLLMGQQYNASLTTLNCQALANACMNFNYDKYALNWFK 192
            :.||:.|...::.||..|:|...|::||::.|::.:..|:..:...:..:..|.....:.|.|.:
 Worm   125 EEDLSGAATALLRLQDTYSLDTLDLSNGIIGGEKVSNKLSGHDTFEVGRSAYNQKDYYHCLMWMQ 189

  Fly   193 AAVDHYNDDRDGQVYR-EVFDFRLPDLYI--NYTSVL-VTKGFRKAA-----------W--KVLQ 240
            .|:....::....:.. |:.::....||.  |....| :||...|.|           |  .:||
 Worm   190 VALVKIENENPPTIEEWEILEYLAYSLYQQGNVRRALSLTKRLAKIAPNHPRAKGNVKWYEDMLQ 254

  Fly   241 D---VADLDATL-------WLLRKDIYEV---GKIDVPDPTFIITPWFDVTGCLRVGQTSQHLSC 292
            .   |.||...:       .::.:|.||.   |:|...:|     .|.:...|            
 Worm   255 GKDMVGDLPPIVNKRVEYDGIVERDAYEALCRGEIPPVEP-----KWKNKLRC------------ 302

  Fly   293 HYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLK------SPLRILYAI 351
             |.|....||::||:|||.|...|..||:.:||:||||..:|.::.|.||      |....|...
 Worm   303 -YLKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHA 366

  Fly   352 DYNL-KFAKIREDHQ---SPLSLRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNIELQD---- 408
            .|.: |.|.::.|..   ..::.||:|.|..:.....:.|:.|||:.|..:.|.|....::    
 Worm   367 TYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAF 431

  Fly   409 QTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLDHRMQPNQDLLHVSCPVV 473
            :|...|:|:.:::|:|:...:|||..|.:|...::|.|..||.|.||....:.:....|.:|||:
 Worm   432 KTLNTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVL 496

  Fly   474 VGSKWTLVKWLHERPQMFSRPC 495
            :|.||...||:||:.|.|:|||
 Worm   497 LGVKWVSNKWIHEKGQEFTRPC 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 35/132 (27%)
P4Hc <371..485 CDD:214780 37/117 (32%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 35/132 (27%)
TPR_16 169..240 CDD:290168 13/70 (19%)
P4Hc 335..508 CDD:214780 51/172 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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