DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18234 and dpy-18

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_499464.1 Gene:dpy-18 / 176569 WormBaseID:WBGene00001077 Length:559 Species:Caenorhabditis elegans


Alignment Length:532 Identity:148/532 - (27%)
Similarity:240/532 - (45%) Gaps:74/532 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRNPEEFVAHPLNAFSLI 91
            |||.|:.|::.|......::.|....:.::..::.|.:|...|.|||..|..:.:.:|:|||.||
 Worm    21 SIADMQNLLETERNIPKILDKYIHDEEERLVQLKKLSEEYSKKNEISIENGLKDITNPINAFLLI 85

  Fly    92 RRLHEDWTQAELLM-LNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISLQQFYNLQPSDIANG 155
            :|...||.:.|..| .|:.|.......:.......|:.:||:.|..|::.||..|.|...|:|:|
 Worm    86 KRKIFDWKEIESKMNANKAGNVVSSITDDSYGVRYPTADDLSGAAIGLLRLQDTYRLDTKDLADG 150

  Fly   156 LLMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAAVDHYNDDRDGQVYREVFD------FR 214
            .:...|.|.:.:..:|..:|.|..|.:...:.:.|.:.|.....|:.:..|  ||.|      |.
 Worm   151 KIYADQGNYTFSAKDCFEIARAAYNEHDFYHTVMWMEEAQRRLGDEVEPTV--EVEDILEYLAFA 213

  Fly   215 L-------------PDLY-IN------------YTSVLVTKGFRKAAW-KVLQDVADL--DATLW 250
            |             .:|| :|            |..:|..:|.|::.. |.|..:.:.  |:.|.
 Worm   214 LYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEGVRRSDMRKNLPPIQNRRPDSVLG 278

  Fly   251 LLRKDIYE-VGKIDVPDPTFIITPWFDVTGCLRVGQTS-QHLSCHYEKNTSEFLRIAPLKVETLS 313
            ...:.:|| :.:.:||                 |.|.. ..|.|:| |....||..||:|||...
 Worm   279 NTERTMYEALCRNEVP-----------------VSQKDISRLYCYY-KRDRPFLVYAPIKVEIKR 325

  Fly   314 LKPHIVLYHDVIYDSEISKVKNISLPSL------KSPLRILYAIDYNL-KFAKIRE---DHQSPL 368
            ..|..||:.|||.|.|::.::.::.|.|      .|....|....|.: |.|.::|   |....:
 Worm   326 FNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETV 390

  Fly   369 SLRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNIELQD----QTAELGDRLTSIMFFMNDVAQ 429
            :.||..||..:::...:.||.||||.|..:.|.|:.:.::    ::...|:|:.:::|:|:..:.
 Worm   391 NKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSH 455

  Fly   430 GGALAFPNLNLTIWPQKGSALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRP 494
            ||...|.....||.|.|..||.|.||..:...|.|..|.:|||:||.||...||:||:...|.||
 Worm   456 GGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNEFRRP 520

  Fly   495 CTTGRKFKSHDQ 506
            |  |.|...:::
 Worm   521 C--GLKSSDYER 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 39/130 (30%)
P4Hc <371..485 CDD:214780 41/117 (35%)
dpy-18NP_499464.1 P4Ha_N 21..152 CDD:285528 39/130 (30%)
P4Hc 338..511 CDD:214780 52/172 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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