DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and LOC110438585

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_021326960.1 Gene:LOC110438585 / 110438585 -ID:- Length:441 Species:Danio rerio


Alignment Length:490 Identity:133/490 - (27%)
Similarity:206/490 - (42%) Gaps:109/490 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LMESLLQEVQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAI--ETG 120
            |..|:|..:.|..|  ..||||.:..|:.|:.|:.||.|     ||:.:    :|.:|:|  .:.
Zfish     5 LHSSVLNHLFSYYE--DENPEENLRDPVAAYKLLCRLRE-----ELIYI----IETIQSIIDVSQ 58

  Fly   121 LEEAQ--------PSDNDLNDAIGGIISLQQFYNLQPSDIA--NGLLMGQQYNASLTTLNCQALA 175
            .:|.|        |...||:.|..|:|.||:.|.|.|.||.  ..|...:.::............
Zfish    59 CDEFQDELKTTLIPQYEDLDGAASGLIRLQEIYKLYPEDITKETSLDADEAFHVGRVAYKEYKFQ 123

  Fly   176 NACMNFNYDKYALNWFKAAVDHYNDDRDGQVYREVFDFRLPDLYINYTSVLVTKGFRKAAWKVL- 239
            :|.:.|:|.  .:.|.:.:..:..|                  .::|.| |..|.|....|.:. 
Zfish   124 HAFLWFSYS--GIRWTENSSTNEKD------------------LLHYLS-LSAKHFGSLPWAIYY 167

  Fly   240 -QDVA-----DLDATLWLLR------------------KDIYEV---GKIDVPDPTFIITPWFDV 277
             |::.     |.:..|.|.|                  ...||.   |::|.             
Zfish   168 SQELLYLNPYDNEVKLQLNRLLHFQKSPNPNIFRLDSLSSNYEALCRGEVDE------------- 219

  Fly   278 TGCLRVGQTSQHLSCHYE-KNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSL 341
                |..:..:.|||.|. ...:..|..||:|.|.|..:|.|:.:||||.|:||..:|:|:.|.|
Zfish   220 ----RTSKRQRALSCRYSTSGGNPRLMYAPVKEEELWDEPKIIRFHDVISDTEIETLKDIARPQL 280

  Fly   342 KSPLRILYAIDYNLKFAKIRE------DHQSP----LSLRIKDMTGEDVQEDTDFQIDNYGICGF 396
            .   |.....|...|.:|.|.      |...|    :|.||:|:||..:::.....:.||||.|.
Zfish   281 S---RSGVYQDGQGKISKHRVSQSVFLDDDDPVDAHVSQRIEDVTGLSMEKAEPLLVQNYGIGGR 342

  Fly   397 RNFHTDNIELQDQTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLDHRMQP 461
            ...|.|.:      .|..||:.:.:.:|:||.:|||..|..:.:.:.|:||||:.|.||....:.
Zfish   343 FEPHIDAL------GEENDRIATFLIYMSDVEEGGATVFIKVGIAVKPEKGSAVFWYNLQKNGES 401

  Fly   462 NQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCT 496
            :.:..|..|||:.|:||...||:.|..|:|.|||:
Zfish   402 DFNTKHAGCPVLQGNKWVANKWIAEFGQVFRRPCS 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 35/110 (32%)
P4Hc <371..485 CDD:214780 39/113 (35%)
LOC110438585XP_021326960.1 P4Ha_N <19..100 CDD:311993 30/89 (34%)
P4Hc 265..424 CDD:214780 53/167 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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