DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18234 and LOC100492280

DIOPT Version :9

Sequence 1:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_031761347.1 Gene:LOC100492280 / 100492280 -ID:- Length:552 Species:Xenopus tropicalis


Alignment Length:571 Identity:152/571 - (26%)
Similarity:245/571 - (42%) Gaps:121/571 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PPIGL--CEITNSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKREISRRN 76
            |.:||  |...:...||..|.:|::.|...::.::.|..|.:.|:..::....::....:.:.::
 Frog     8 PLLGLFSCAHADFFTSIGHMTDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTATKD 72

  Fly    77 PEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQPSDNDLNDAIGGIISL 141
            ||.|:.||:|||.|::||:.:|.:.|.|:|..:....:..: |...:..|:|.|...|...::.|
 Frog    73 PEGFLGHPVNAFKLMKRLNTEWVKLENLILKDISDGFISNL-TIQRQYFPNDEDQTGAAKALLRL 136

  Fly   142 QQFYNLQPSDIANGLLMGQQYNASLTTLNCQALANACMNFNYDKYALN-WFKAAVDHYNDDRDGQ 205
            |..|||....|:.|.|.|.::..|||..:|..|...... :.|.|... |.:.|:...:...:..
 Frog   137 QDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYT-DADYYHTELWMEQALSQLDAGEESS 200

  Fly   206 VYR-EVFDFRLPDLYINYTSVLVTKGFRKAAWKVLQDVADLDATLWLLRKDIYEVGKIDVPDP-- 267
            :.: .|.|      |::|.              |.|. .|||..| .|.|.:.|:      ||  
 Frog   201 LDKVMVLD------YLSYA--------------VYQQ-GDLDKAL-TLTKLLLEL------DPEH 237

  Fly   268 ----------TFIITPWFDVTGC---------LRVGQTSQHLS---------------------- 291
                      .:|::...:.:..         .|.|:...||.                      
 Frog   238 QRGNGNLRYFEYIMSKESNKSSSSPSEGAELGTRKGRPKDHLPERQKYEKLCRGEGVKMTSRRQK 302

  Fly   292 ---CHY-EKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLK-----SPLR- 346
               |.| :.|....|.::|.|.|....||.||.|||:|.|.||||||.::.|.|:     :|:. 
 Frog   303 RLFCRYFDGNKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITG 367

  Fly   347 ILYAIDYNLKFAKIREDHQSP----------------------------LSLRIKDMTGEDVQED 383
            :|....|  :.:|.|.....|                            |:.||:.:||.|:...
 Frog   368 VLETAQY--RISKRRATVHDPQTGKLTTAQYRVSKSAWLSAYEDPVVARLNRRIEGVTGLDMSTA 430

  Fly   384 TDFQIDNYGICGFRNFHTDNIELQDQTA--EL--GDRLTSIMFFMNDVAQGGALAFPNLNLTIWP 444
            .:.|:.|||:.|....|.|.....:..|  ||  |:|:.:.:|:|:||..|||..||.:...::|
 Frog   431 EELQVANYGMGGQYEPHFDFARKDEPDAFKELGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYP 495

  Fly   445 QKGSALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495
            :||:|:.|.||....:.:....|.:|||:||:||...||:|||.|.|.|||
 Frog   496 KKGTAVFWYNLFESGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 35/129 (27%)
P4Hc <371..485 CDD:214780 43/117 (37%)
LOC100492280XP_031761347.1 P4Ha_N 24..111 CDD:400573 22/86 (26%)
P4Hc 341..536 CDD:214780 59/196 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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