DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4174 and p4htma

DIOPT Version :10

Sequence 1:NP_730342.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_001074160.1 Gene:p4htma / 791209 ZFINID:ZDB-GENE-070112-2222 Length:478 Species:Danio rerio


Alignment Length:359 Identity:77/359 - (21%)
Similarity:123/359 - (34%) Gaps:146/359 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 LKIKLWNYPNLLESLVEAN--------KGLGHYFEAKKYANELLSINPNHTYMLTQ--------- 255
            ||..|:..|..| |:.|:|        |||.|        :.||: ||:....|||         
Zfish   138 LKPLLFEIPGFL-SVEESNVVMQLAQLKGLTH--------SSLLT-NPDQEEQLTQDELFSLLDL 192

  Fly   256 ----------LPKLKH------LQS-NPAKL-----TKPKKVFQLQKEICSKRYRRKSGVLVCRY 298
                      :..|.|      |.| |..|:     |.|..|..||:      ::|.||. |.||
Zfish   193 NQDGLLQREEILSLSHSTDGSWLSSYNLRKIHTGLETNPSGVLSLQE------FKRVSGG-VLRY 250

  Fly   299 VDWTPFLKLAPLKMEELSMKPYISIFYGFLGQKDIEVLKNVSRPKLQRIEHLSGNCSCKIGNLST 363
            ......|. ...|:.:.|....:     :||:....:||:|.    .|:..|:        .|.:
Zfish   251 SGAAQGLD-GHTKVRQRSTHTRL-----YLGEGTHHLLKSVR----NRVTRLT--------RLPS 297

  Fly   364 SLHDVVRKVNELILGITGFPLKGNQMLEVINY--GIAGNYNPEEPKIH------------NKAN- 413
            ||.|:                  ::.:||:.|  |:..:.:.:....|            |.:| 
Zfish   298 SLVDL------------------SEAMEVVRYEQGVFSHAHHDSSPTHPDNSCTHTHLAANTSNQ 344

  Fly   414 -------AFIFLSNAGKGGEIVFP---------------------SRHLKVRPRKGSMLVWEN-- 448
                   ..::|::|..|||..||                     ..:|||:|..|:.|:|.|  
Zfish   345 VACRYLTVLLYLNSADSGGETSFPVADNRTYEEEVLGDLSQQYCDKGNLKVKPVAGTALLWYNHL 409

  Fly   449 ---------LKKSLIYHQCPILKGNMWVANKVLN 473
                     |.:..::..|.:.:|..|..:..:|
Zfish   410 SDGNGWVGELDEFSLHGDCLVTRGFKWTGSVWVN 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4174NP_730342.2 P4Ha_N 33..159 CDD:462433
TPR repeat 169..197 CDD:276809
TPR repeat 202..245 CDD:276809 14/44 (32%)
PLN00052 311..>470 CDD:177683 39/212 (18%)
p4htmaNP_001074160.1 XopAW 169..>240 CDD:469301 18/77 (23%)
PLN00052 <248..471 CDD:177683 43/232 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.