DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4174 and PH4alphaPV

DIOPT Version :9

Sequence 1:NP_001034031.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster


Alignment Length:512 Identity:134/512 - (26%)
Similarity:244/512 - (47%) Gaps:85/512 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QVKGEVVSAPESYDFAISSESQLSLLKLKETHVNNLQSYKKVLKKHLQKIRRAIR----QSEELL 75
            |.|||     ||:  ..|....:.||.|:...::||:.|...|:|.||.:||:|.    ::::..
  Fly    25 QAKGE-----ESH--CTSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKAR 82

  Fly    76 KSTKTSPRNLIYGYKVLRHLHNDWPQYFRLLKKDLGLEQIAVSQMLLTQQPTSVDFEESMGAMHR 140
            .||:....|.:..:.::|.::.||..:...:...:|:.|:...|.|....||..|.||::.|:.|
  Fly    83 SSTEEYLSNPLNSFSLIRRMNRDWIIWQLYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDR 147

  Fly   141 LQTVYNLDSYAMTEGFIDDKDKNIRNWSADECLMLGLMYLFLKDYNQSENWL--ELALYHYDDNV 203
            :|:.|.|....::.||::.|..|:.....|...| |.:....|:|..:.:|:  .:.|.......
  Fly   148 IQSTYGLKVPEISHGFLNGKQYNVSLTVLDTYAM-GQILFDQKNYLAAASWIYQSVVLMEAFSMA 211

  Fly   204 SP-EVLKIKLWNYPNLL--ESLVEANKGLGHYFEAKKYANELLSINPNHTYMLTQLPKLKHLQSN 265
            :| |:.|    |...::  |:|::.|:    :.:|.|..|..|:.||:...:|.:..:::.:...
  Fly   212 APLEISK----NEVRMVYAETLLKLNQ----HADALKVVNIALTDNPHDIKLLLKKSEIETMIRT 268

  Fly   266 PAKLTKPKKV--------FQLQKEICSKRYRRKS-GVLVCRYVDWT-PFLKLAPLKMEELSMKPY 320
            ......|.||        :|:.   |..::...: ..|.|.|...| |||.|||||||.:.:.||
  Fly   269 GTNNAPPVKVQATGVPTAYQIG---CRGQFPPSADSKLYCLYNRTTSPFLILAPLKMELVGLDPY 330

  Fly   321 ISIFYGFLGQKDIEVLKNVSRPKLQRIEHLSGNCSCKIGNLSTSLHDVVR--------------- 370
            :.:::..|..|:|:.|:.::.|.|:|         ..:...|:..::||:               
  Fly   331 MVLYHDVLSPKEIKELQGMATPGLKR---------ATVYQASSGRNEVVKTRTSKVAWFPDGYNP 386

  Fly   371 ---KVNELILGITGFPLKGNQMLEVINYGIAGNYNPEEPKIHNKANA-------------FIFLS 419
               ::|..|..:|||.|.|::||:::|||:.|:|: :.....||.|:             ..:|:
  Fly   387 LTVRLNARISDMTGFNLYGSEMLQLMNYGLGGHYD-QHYDFFNKTNSNMTAMSGDRIATVLFYLT 450

  Fly   420 NAGKGGEIVFPSRHLKVRPRKGSMLVWENLKKS------LIYHQCPILKGNMWVANK 470
            :..:||..|||:....|.|::||:::|.|||.:      .::..||::.|:.||.||
  Fly   451 DVEQGGATVFPNIRKAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4174NP_001034031.2 P4Ha_N 33..157 CDD:285528 34/127 (27%)
TPR repeat 169..197 CDD:276809 6/29 (21%)
TPR repeat 202..245 CDD:276809 11/45 (24%)
2OG-FeII_Oxy <362..470 CDD:304390 39/144 (27%)
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 35/128 (27%)
TPR_11 179..250 CDD:290150 17/79 (22%)
TPR repeat 179..213 CDD:276809 6/34 (18%)
TPR repeat 218..248 CDD:276809 9/37 (24%)
P4Hc 339..510 CDD:214780 47/179 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461853
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.000

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