DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4174 and PH4alphaNE2

DIOPT Version :9

Sequence 1:NP_001034031.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster


Alignment Length:522 Identity:116/522 - (22%)
Similarity:226/522 - (43%) Gaps:57/522 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLFHFVVVTACLGFQVK-GEVVSAPESYDFAISSESQLSLLKLKETHVNNLQSYKKVLKKHLQKI 64
            |||..:|:...|...:. |::........||.|..:...:|.|::..|:|::...:.|.:..:.|
  Fly     1 MLFWRLVLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTI 65

  Fly    65 R----RAIRQSEELLKSTKTSPRNLIYGYKVLRHLHNDWPQYFRLLKKDLGLEQIAVSQMLLTQQ 125
            :    :.:::.:| .||:.....|.|..:.::||:.::|..:...|:..:|.|::......:...
  Fly    66 KWGVFKMMKRRQE-YKSSMEIFANPIDTFSLIRHMQSNWLMWLLYLETPVGQEELFFVDSRMPLL 129

  Fly   126 PTSVDFEESMGAMHRLQTVYNLDSYAMTEGFIDDKDKNIRNWSADECLMLGLMYLFLKDYNQSEN 190
            |...||.::...:.::|..|.:.|..:.:|.:|....| .:....:||.:||..:....:..:|.
  Fly   130 PKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYN-SSLKPIDCLAIGLHLMNNSRWYAAEQ 193

  Fly   191 WLELALYHYDDNVSPEVLKI----KLWNYPNLLESLVEANKGLGHYFEAKKYANELLSINPN--H 249
            |:..::..||...|...:::    ||.:...:|..:....:......:|.:.|.:|...:|.  .
  Fly   194 WISASIEAYDQKSSQTDMELLRGPKLADLCRILGQVQMKQRNHEGALQAYQVALKLSPHDPEIYE 258

  Fly   250 TYMLTQLPKLKHLQSNPAKLTKPKKVFQL-QKEICSKRYR--RKSGVLVCRYVDWT-PFLKLAPL 310
            .|.:.:...|......|.:..|.....:| ....||.|.:  |....|.|.|...| |||:|||:
  Fly   259 EYRILEKRDLTLSDIEPIEQDKDNSHERLVLPPCCSGRCQVPRNLSNLYCVYNHVTSPFLQLAPI 323

  Fly   311 KMEELSMKPYISIFYGFLGQKDIEVLKNVSRPKLQRIEHL---------SGNCSCKIGNLSTS-- 364
            |.|.||:.|::.:.:..:.||:..:::..|:      ||:         :.:...::....||  
  Fly   324 KTEILSIDPFVVLLHDMISQKESTLIRTSSK------EHMLPSATTDPDASDDETQVDTYRTSKS 382

  Fly   365 ------LHDVVRKVNELILGITGFPLKGNQMLEVINYGIAGNYNPEEPKIHNKANAF-------- 415
                  .:|..:|:.|.:...||..:...:..:|||||:.|.:......:.::.|.|        
  Fly   383 VWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFETHLDMLLSEKNRFNGTSDRIA 447

  Fly   416 ---IFLSNAGKGGEIVFPSRHLKVRPRKGSMLVWENL------KKSLIYHQCPILKGNMWVANKV 471
               .:|:...:||...||..:|.|.|:.||.|.|.||      ....::..||::.|:.||.:|.
  Fly   448 TTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGNDHMGSLHTGCPVIVGSKWVMSKW 512

  Fly   472 LN 473
            :|
  Fly   513 IN 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4174NP_001034031.2 P4Ha_N 33..157 CDD:285528 24/127 (19%)
TPR repeat 169..197 CDD:276809 6/27 (22%)
TPR repeat 202..245 CDD:276809 7/46 (15%)
2OG-FeII_Oxy <362..470 CDD:304390 34/132 (26%)
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 25/128 (20%)
TPR repeat 175..200 CDD:276809 6/24 (25%)
TPR_16 176..254 CDD:290168 14/77 (18%)
TPR repeat 219..249 CDD:276809 4/29 (14%)
TPR_2 220..253 CDD:285020 4/32 (13%)
P4Hc 342..513 CDD:214780 40/176 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461863
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.000

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