DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4174 and phy-4

DIOPT Version :9

Sequence 1:NP_001034031.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_001123049.1 Gene:phy-4 / 189869 WormBaseID:WBGene00012815 Length:282 Species:Caenorhabditis elegans


Alignment Length:241 Identity:59/241 - (24%)
Similarity:95/241 - (39%) Gaps:67/241 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 CSKRYR---RKSGVLVCRYVDWTPFLKLAPLKMEELSMKPYISIFYGFLGQKDIEVLKNVSRPKL 344
            |.|..|   .:.|.|||    :.....|...|:|.||.:|:|..::.       :|.:.:::..:
 Worm    36 CGKELRGDSSRDGRLVC----YRLHKHLLIRKVEILSSEPFILQYHN-------QVHRRLAKRAV 89

  Fly   345 Q-----RIEHLSGNCSCKIGNLSTSLH-DVVRKVNELILGITGFP--------LKGN-------- 387
            |     |:|.|      ||...:|:.. ..||..|...|..||.|        |:.|        
 Worm    90 QEAEALRLEQL------KISGFTTTPEKSQVRAANGTWLIHTGRPSFARIFEGLQANINSLDLST 148

  Fly   388 -QMLEVINYGIAGNYNPE-------------EPKIHNKANAFIFLSNAGKGGEIVFPSRHLKVRP 438
             :..::::|...|.|.|.             |.:.:..|...:.|..|.|||..|||..:|.:||
 Worm   149 AEPWQILSYNADGYYAPHYDYLNPATNVQLVEGRGNRIATVLVILQIAKKGGTTVFPRLNLNIRP 213

  Fly   439 RKGSMLVWENL------KKSLIYHQCPILKG-----NMWVANKVLN 473
            :.|.::||.|.      ....::..|||.:|     .:||..|:.:
 Worm   214 KAGDVIVWLNTLSTGESNSQTLHAACPIHEGTKIGATLWVHEKIFS 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4174NP_001034031.2 P4Ha_N 33..157 CDD:285528
TPR repeat 169..197 CDD:276809
TPR repeat 202..245 CDD:276809
2OG-FeII_Oxy <362..470 CDD:304390 37/149 (25%)
phy-4NP_001123049.1 P4Hc 81..254 CDD:214780 42/178 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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