DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4174 and phy-2

DIOPT Version :9

Sequence 1:NP_001034031.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_502317.1 Gene:phy-2 / 178170 WormBaseID:WBGene00004025 Length:539 Species:Caenorhabditis elegans


Alignment Length:485 Identity:121/485 - (24%)
Similarity:193/485 - (39%) Gaps:82/485 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LQSYKKVLKKHLQKIRRAIRQ-------SEELLKSTKTSPRNLIYGYKVLRHLHNDWPQYFRLL- 106
            :..|.:..:..|..:||...:       :|.:.....|:|.|   .|.:::.|..:|.:...:: 
 Worm    39 IDQYIEAERARLDDLRRYAHEYVHRNAHAESVGPEFVTNPIN---AYLLIKRLTTEWKKVENIML 100

  Fly   107 --KKDLGLEQIAVSQMLL-TQQPTSVDFEESMGAMHRLQTVYNLDSYAMTEGFIDDKDKNIRNWS 168
              |....|:.|..:::.. .:.|...|...:..|:.|||..|:||:..::.|.|.. :|.....|
 Worm   101 NNKASTFLKNITDNRVRSEVKFPGEEDLSGAATALLRLQDTYSLDTLDLSNGIIGG-EKVSNKLS 164

  Fly   169 ADECLMLGLMYLFLKDYNQSENWLELALYHYDDNVSPEVLKIKLWNYPNLLESLVEANKGLGHYF 233
            ..:...:|......|||.....|:::||...::...|   .|:.|   .:||.|..:....|:..
 Worm   165 GHDTFEVGRSAYNQKDYYHCLMWMQVALVKIENENPP---TIEEW---EILEYLAYSLYQQGNVR 223

  Fly   234 EAKKYANELLSINPNHTYMLTQLPKLKHLQSNPAKLTKPKKVFQLQKEICSKR------YRRKSG 292
            .|......|..|.|||       |:.|........:.:.|.:......|.:||      ..|.:.
 Worm   224 RALSLTKRLAKIAPNH-------PRAKGNVKWYEDMLQGKDMVGDLPPIVNKRVEYDGIVERDAY 281

  Fly   293 VLVCR------YVDW-----------TPFLKLAPLKMEELSMKPYISIFYGFLGQKDIEVLKNVS 340
            ..:||      ...|           .|||||||:|:|.|...|...:|...:...:|||:|.::
 Worm   282 EALCRGEIPPVEPKWKNKLRCYLKRDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELA 346

  Fly   341 RPKLQR----------IEHLSGNCSCKIGNLSTSLHDVVRKVNELILGITGFPLKGNQMLEVINY 395
            .|||:|          :||.:...| |...|...|..|:.:||..|...|......::.|:|.||
 Worm   347 SPKLKRATVQNSKTGELEHATYRIS-KSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANY 410

  Fly   396 GIAGNYNP-------EEP---KIHNKAN----AFIFLSNAGKGGEIVFPSRHLKVRPRKGSMLVW 446
            |:.|:|:|       ||.   |..|..|    ...::|...:||..||......|.|.|...|.|
 Worm   411 GLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFW 475

  Fly   447 ENLKKS------LIYHQCPILKGNMWVANK 470
            .||::.      ..:..||:|.|..||:||
 Worm   476 YNLRRDGEGDLRTRHAACPVLLGVKWVSNK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4174NP_001034031.2 P4Ha_N 33..157 CDD:285528 24/117 (21%)
TPR repeat 169..197 CDD:276809 6/27 (22%)
TPR repeat 202..245 CDD:276809 9/42 (21%)
2OG-FeII_Oxy <362..470 CDD:304390 37/127 (29%)
phy-2NP_502317.1 P4Ha_N 21..154 CDD:285528 24/117 (21%)
TPR_16 169..240 CDD:290168 20/83 (24%)
P4Hc 335..508 CDD:214780 52/172 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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