DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R1 and sstr1b

DIOPT Version :10

Sequence 1:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_005172275.2 Gene:sstr1b / 557645 ZFINID:ZDB-GENE-120410-2 Length:371 Species:Danio rerio


Alignment Length:319 Identity:130/319 - (40%)
Similarity:197/319 - (61%) Gaps:25/319 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EESLYGTDLP-----TYQHCIATRNSFADLFTVV---LYGFVCIIGLFGNTLVIYVVLRFSKMQT 110
            |..:..||||     .|::    ..|..|...::   :|..||.||:.||.:||||:|:::||:|
Zfish    11 ESFMLATDLPFNSTGDYEY----YESEPDASKIIIPSIYALVCCIGVTGNAMVIYVILKYAKMKT 71

  Fly   111 VTNIYILNLAVADECFLIGIPFLLYTMRICSWRFGEFMCKAYMVSTSITSFTSSIFLLIMSADRY 175
            .|||||||||:|||.|::.:|||..:..:..|.||..||:..:....|..|||...|.::|.|||
Zfish    72 ATNIYILNLAIADELFMLSVPFLATSAAVHHWPFGSLMCRLVLSVDGINMFTSIFCLTVLSVDRY 136

  Fly   176 IAVCHPISSPRYRTLHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDGINYSCNIMWPDAYKKHS 240
            |||.|||.:.|||...:||||:...|..|.:::||:|::|.||..:|| ...||.|||::....:
Zfish   137 IAVVHPIKAARYRRPTVAKVVNVCVWGLSLLVILPIIIFADTVPAQDG-GVDCNFMWPESSWSEA 200

  Fly   241 GTTFILYTFFLGFATPLCFILSFYYLVIRKLRSVGPKPGTKSKEKRRAHRKVTRLVLTVISVYIL 305
               |::|||.|||..|:..|...|.|::.::|:||.|.|.  .::||:.:|:||:||.|::|::|
Zfish   201 ---FVVYTFLLGFLLPVGAICLCYCLIVVRMRAVGLKAGW--LQRRRSEKKITRMVLLVVAVFVL 260

  Fly   306 CWLPHWISQVALIHSNPAQRDLSRLEILIFLLLGALVYSNSAVNPILYAFLSENFRKSF 364
            ||:|.:|.|:..:...|....:::|.::       |.|:||..|||||.|:|:|||:||
Zfish   261 CWMPFYIVQLISVFRKPPDPMVTQLFVI-------LSYANSGANPILYGFVSDNFRRSF 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 120/288 (42%)
TM helix 1 79..105 CDD:320222 12/28 (43%)
TM helix 2 112..138 CDD:320222 16/25 (64%)
TM helix 3 149..179 CDD:320222 12/29 (41%)
TM helix 4 191..213 CDD:320222 8/21 (38%)
TM helix 5 241..270 CDD:320222 11/28 (39%)
TM helix 6 287..317 CDD:320222 14/29 (48%)
TM helix 7 332..357 CDD:320222 10/24 (42%)
sstr1bXP_005172275.2 None

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