DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstC-R1 and Rh7

DIOPT Version :9

Sequence 1:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster


Alignment Length:502 Identity:103/502 - (20%)
Similarity:186/502 - (37%) Gaps:120/502 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ANATNWYNTNESLYTTELNHRWISGSSTIQPEESLYGTD------------------LPTYQH-- 67
            ||:::.::|..:..|        :|||..:......|.|                  .|:|.|  
  Fly    34 ANSSHSHSTGSTTST--------AGSSATESSAVNVGKDHDKHVNDSVSTGLSNYSNYPSYIHYR 90

  Fly    68 ------CIATRNSF----------ADLFTVVLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYI 116
                  .||..|.|          ..|....||..:.::|..||..||::......::|..||.:
  Fly    91 DKYDLSYIAKVNPFWLQFEPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILV 155

  Fly   117 LNLAVADECFLIGIPFLLYTMRICSWRFGEFMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHP 181
            :|||:.|...||..|..:|.........|:..|:.|.....::...:...|..::.|||..|.||
  Fly   156 MNLAICDFLMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHP 220

  Fly   182 ISSPRYRTLHIAKVVSAIAWSTSAVL-MLPVILYASTVEQEDGINYSCNIMWPDAYKKHSGTTFI 245
            :...|..:...:.::..:.|..|.:. ::|.:....:|...:|...:|:.   |...|.......
  Fly   221 LQPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSF---DYLNKEMPARIF 282

  Fly   246 LYTFFL-GFATPLCFILSFYYLVIR------KLRSVGPKPGTKSKEKRRAHRKVTRLVLTVISVY 303
            :..||: .:..||..|:..|:.:::      :::|        :|:|.:..:|:..:|..:|.::
  Fly   283 MALFFVAAYCIPLTSIVYSYFYILKVVFTASRIQS--------NKDKAKTEQKLAFIVAAIIGLW 339

  Fly   304 ILCWLPHWISQVALIHSNPAQRDLSRLEILIFLLLGALVYSNSA-VNPILYAFLSENFRKSFFKA 367
            .|.|.|:.|  ||::.....:|.::.|..:|    .||....:| |:|.|||.....||......
  Fly   340 FLAWSPYAI--VAMMGVFGLERHITPLGSMI----PALFCKTAACVDPYLYAATHPRFRVEVRML 398

  Fly   368 FTCMNKQDINAQLQLEPSVFTKQGSKKRGGSKRLLTSNPQIPPLLPLNAGNNNSSTTTSSTTTAE 432
            |                        ..||..:|:.|:.            ::..:.:.||.|...
  Fly   399 F------------------------YGRGVLRRVSTTR------------SSYMTRSRSSFTHRL 427

  Fly   433 KTGTTG--------TQKSCNSNGKVTAPPENLIICLSEQQEAFCTTA 471
            :|.|||        .:....:|..:..|.|      :|:.|.....|
  Fly   428 RTSTTGEGGMGDHRMENYLMNNNLMMVPEE------TEENEEIVVVA 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R1NP_649040.2 7tm_4 88..368 CDD:304433 66/288 (23%)
7tm_1 94..353 CDD:278431 60/267 (22%)
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 29/121 (24%)
7tm_1 133..384 CDD:278431 60/267 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435319
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.