DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R1 and Oprk1

DIOPT Version :10

Sequence 1:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_038965287.1 Gene:Oprk1 / 29335 RGDID:69426 Length:431 Species:Rattus norvegicus


Alignment Length:392 Identity:130/392 - (33%)
Similarity:199/392 - (50%) Gaps:54/392 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MMDVLQFVKGE---MTADSEA---NATNWY------NTNESLYTTELNHRWISGSSTIQPEESLY 58
            |...:|..:||   ..|.|..   |:::|:      ::|.|:           ||...|.|.:..
  Rat    52 MESPIQIFRGEPGPTCAPSACLLPNSSSWFPNWAESDSNGSV-----------GSEDQQLEPAHI 105

  Fly    59 GTDLPTYQHCIATRNSFADLFTVVLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYILNLAVAD 123
            ...:|.             :.|.| |..|.::||.||:||::|::|::||:|.|||||.|||:||
  Rat   106 SPAIPV-------------IITAV-YSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALAD 156

  Fly   124 ECFLIGIPF--LLYTMRICSWRFGEFMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPR 186
            ......:||  .:|.|.  ||.||:.:||..:.......|||...|.:||.|||||||||:.:..
  Rat   157 ALVTTTMPFQSAVYLMN--SWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALD 219

  Fly   187 YRTLHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDGINYSCNIMWPDAYKKHSGTTFILYTFFL 251
            :||...||:::...|..::.:.:..|:...|..:||.....|::.:||...........:..|..
  Rat   220 FRTPLKAKIINICIWLLASSVGISAIVLGGTKVREDVDVIECSLQFPDDEYSWWDLFMKICVFVF 284

  Fly   252 GFATPLCFILSFYYLVIRKLRSVGPKPGTKSKEKRRAHRKVTRLVLTVISVYILCWLP-H-WISQ 314
            .|..|:..|:..|.|:|.:|:||....|  |:||.|..|::|:|||.|::|:|:||.| | :|..
  Rat   285 AFVIPVLIIIVCYTLMILRLKSVRLLSG--SREKDRNLRRITKLVLVVVAVFIICWTPIHIFILV 347

  Fly   315 VALIHSNPAQRDLSRLEILIFLLLGALVYSNSAVNPILYAFLSENFRKSF----FKAFTCMNKQD 375
            .||..::.:...||.....|     ||.|:||::||:|||||.|||::.|    |.....|.:|.
  Rat   348 EALGSTSHSTAVLSSYYFCI-----ALGYTNSSLNPVLYAFLDENFKRCFRDFCFPIKMRMERQS 407

  Fly   376 IN 377
            .|
  Rat   408 TN 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 110/289 (38%)
TM helix 1 79..105 CDD:320222 11/25 (44%)
TM helix 2 112..138 CDD:320222 13/27 (48%)
TM helix 3 149..179 CDD:320222 13/29 (45%)
TM helix 4 191..213 CDD:320222 3/21 (14%)
TM helix 5 241..270 CDD:320222 7/28 (25%)
TM helix 6 287..317 CDD:320222 14/31 (45%)
TM helix 7 332..357 CDD:320222 12/24 (50%)
Oprk1XP_038965287.1 7tmA_Kappa_opioid_R 111..392 CDD:320219 110/303 (36%)
TM helix 1 112..138 CDD:320219 11/26 (42%)
TM helix 2 145..171 CDD:320219 12/25 (48%)
TM helix 3 182..212 CDD:320219 13/29 (45%)
TM helix 4 224..246 CDD:320219 3/21 (14%)
TM helix 5 274..303 CDD:320219 7/28 (25%)
TM helix 6 318..348 CDD:320219 14/29 (48%)
TM helix 7 360..385 CDD:320219 14/29 (48%)

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