DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstC-R1 and Tacr3

DIOPT Version :10

Sequence 1:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_058749.1 Gene:Tacr3 / 24808 RGDID:3810 Length:452 Species:Rattus norvegicus


Alignment Length:471 Identity:120/471 - (25%)
Similarity:210/471 - (44%) Gaps:80/471 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KGEMTADSEAN-ATNWYNTNESLYTTELNHRWISGSSTIQPEESLYGTDLP-TYQHCIATRNSFA 76
            :||...|.... .|:..|.:.:|..||    |::    :|.........|| |.|.....|.:..
  Rat     6 RGENWTDGTVEVGTHTGNLSSALGVTE----WLA----LQAGNFSSALGLPATTQAPSQVRANLT 62

  Fly    77 DLFT---------VVLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYILNLAVADECF-----L 127
            :.|.         .:.||.|..:.:|||.:||:::|...:|:||||.:::|||.:|...     |
  Rat    63 NQFVQPSWRIALWSLAYGLVVAVAVFGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASVAAFNTL 127

  Fly   128 IGIPFLLYTMRICSWRFGEFMCKAYMVSTSITSFTSSIF-LLIMSADRYIAVCHPISSPRYRTLH 191
            |...:.|::    .|.||...|: :.....||:..:||: :..::.|||:|:..|: .||. :..
  Rat   128 INFIYGLHS----EWYFGANYCR-FQNFFPITAVFASIYSMTAIAVDRYMAIIDPL-KPRL-SAT 185

  Fly   192 IAKVVSAIAWSTSAVLMLPVILYASTVEQEDGINYSCNIMWPDAYKKHSGTTFILYTFFLGFATP 256
            ..|:|....|..:.:|..|..|| |.::...| ...|.:.||:..|:|  .|:.:....|.:..|
  Rat   186 ATKIVIGSIWILAFLLAFPQCLY-SKIKVMPG-RTLCYVQWPEGPKQH--FTYHIIVIILVYCFP 246

  Fly   257 LCFILSFYYLVIRKLRSVGPKPG---TKSKEKRRAHRKVTRLVLTVISVYILCWLPHWISQVALI 318
            | .|:...|.::......|..||   .|..|:.:|.|||.::::.|:..:.:||||:.:..:.  
  Rat   247 L-LIMGVTYTIVGITLWGGEIPGDTCDKYHEQLKAKRKVVKMMIIVVVTFAICWLPYHVYFIL-- 308

  Fly   319 HSNPAQRDLSRLEIL--IFLLLGALVYSNSAVNPILYAFLSENFRKSFFKAFT-C----MNKQDI 376
              ....:.|:|.:.:  ::|....|..|::..|||:|..|::.||..|.:||. |    ::..| 
  Rat   309 --TAIYQQLNRWKYIQQVYLASFWLAMSSTMYNPIIYCCLNKRFRAGFKRAFRWCPFIQVSSYD- 370

  Fly   377 NAQLQLEPSVF--TKQGS---------------------KKRGGSKRLLTSNPQIPPLLPLNAGN 418
              :|:|:.:.|  |:|.|                     .|....||.:   |:.|.....:...
  Rat   371 --ELELKTTRFHPTRQSSLYTVSRMESVTVLFDPNDGDPTKSSRKKRAV---PRDPSANGCSHRG 430

  Fly   419 NNSSTTTSSTTTAEKT 434
            :.|::||||..::..|
  Rat   431 SKSASTTSSFISSPYT 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 83/305 (27%)
TM helix 1 79..105 CDD:320222 10/34 (29%)
TM helix 2 112..138 CDD:320222 9/30 (30%)
TM helix 3 149..179 CDD:320222 9/30 (30%)
TM helix 4 191..213 CDD:320222 5/21 (24%)
TM helix 5 241..270 CDD:320222 6/28 (21%)
TM helix 6 287..317 CDD:320222 9/29 (31%)
TM helix 7 332..357 CDD:320222 7/26 (27%)
Tacr3NP_058749.1 7tmA_NKR_NK3R 73..354 CDD:320669 82/296 (28%)
TM helix 1 74..100 CDD:320669 9/25 (36%)
TM helix 2 107..133 CDD:320669 8/25 (32%)
TM helix 3 145..175 CDD:320669 9/30 (30%)
TM helix 4 186..207 CDD:320669 5/20 (25%)
TM helix 5 231..260 CDD:320669 7/31 (23%)
TM helix 6 279..309 CDD:320669 9/33 (27%)
TM helix 7 322..347 CDD:320669 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..452 11/50 (22%)

Return to query results.
Submit another query.