DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R1 and XB5962511

DIOPT Version :10

Sequence 1:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001096443.1 Gene:XB5962511 / 100125055 XenbaseID:XB-GENE-5962512 Length:369 Species:Xenopus tropicalis


Alignment Length:318 Identity:102/318 - (32%)
Similarity:161/318 - (50%) Gaps:20/318 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 ADLFTVVLYGFVCIIGLFGNTLVIYVVLRF-SKMQTVTNIYILNLAVADECFLI-GIPFLLYTMR 138
            |.:...|::..:.::|..||:||:.|:||. .:....||::||||:|||..|:| .:||......
 Frog    25 ASIVVPVIFSLIFLLGTVGNSLVLAVLLRSGQRTHNTTNLFILNLSVADVSFIIFCVPFQATIYS 89

  Fly   139 ICSWRFGEFMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTLHIAKVVSAIAWST 203
            :..|.||.|||||......:|.:.||..|..:|.|||:|:.:|:.|...||...|....||.|..
 Frog    90 LEDWVFGAFMCKAVHFFIYLTMYASSFTLAAVSVDRYLAIRYPLRSRELRTPCNAIATMAIIWGL 154

  Fly   204 SAVLMLPVILYASTVEQEDGINYSCNIMWPDAYKKHSGTTFILYTFFLGFATPLCFILSFYYLVI 268
            |.|...|.:.|...::.|.  ::.|...|.:..:|...|.    ||.:|:..|: .|:|..|...
 Frog   155 SVVFAGPYLSYYDLMDYES--SHICMPGWKERTRKIMDTG----TFIVGYVIPV-LIVSLSYTRT 212

  Fly   269 RKLRSVGPKPGTKSKEKRRAHRKVTRLVLTVISVYILCWLPHWISQVALIHSN-PAQRDLSRLEI 332
            .|.......|.....|.::|.||||::::.|..::.||||||.:..:..::.: |    .::...
 Frog   213 IKYLWTAVDPLEDMSESKKAKRKVTKMIIIVTVLFCLCWLPHHVVVMCYLYGDFP----FNQATY 273

  Fly   333 LIFLLLGALVYSNSAVNPILYAFLSENFRKSFFKAFTCM------NKQDINAQLQLEP 384
            ...||...:.|:||.:|||:||.:|::|||.|.|.|:|:      ||..:......||
 Frog   274 AFRLLSHCMAYANSCLNPIVYALVSKHFRKGFQKVFSCLLRKKGRNKVHVVNAAHAEP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 93/288 (32%)
TM helix 1 79..105 CDD:320222 8/25 (32%)
TM helix 2 112..138 CDD:320222 13/26 (50%)
TM helix 3 149..179 CDD:320222 12/29 (41%)
TM helix 4 191..213 CDD:320222 7/21 (33%)
TM helix 5 241..270 CDD:320222 8/28 (29%)
TM helix 6 287..317 CDD:320222 12/29 (41%)
TM helix 7 332..357 CDD:320222 10/24 (42%)
XB5962511NP_001096443.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 93/288 (32%)
TM helix 1 28..54 CDD:320225 8/25 (32%)
TM helix 2 62..88 CDD:320225 13/25 (52%)
TM helix 3 100..130 CDD:320225 12/29 (41%)
TM helix 4 142..162 CDD:320225 6/19 (32%)
TM helix 5 186..215 CDD:320225 9/33 (27%)
TM helix 6 231..261 CDD:320225 12/29 (41%)
TM helix 7 273..298 CDD:320225 10/24 (42%)

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