DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R1 and tacr1a

DIOPT Version :10

Sequence 1:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001257407.1 Gene:tacr1a / 100003539 ZFINID:ZDB-GENE-060526-185 Length:426 Species:Danio rerio


Alignment Length:440 Identity:109/440 - (24%)
Similarity:191/440 - (43%) Gaps:69/440 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TTELNHRWISGSSTIQPEESLYGTDLPTYQHCIATRNSFAD-LFTVVL----YGFVCIIGLFGNT 96
            :|:....| :.:||.|.|..:|.             |.|.. ::.:||    |..:.::.:.||.
Zfish     7 STDFPSNW-TVNSTAQNETEIYW-------------NQFVQPVWRIVLWAVAYSTIVVVSVVGNI 57

  Fly    97 LVIYVVLRFSKMQTVTNIYILNLAVAD---ECFLIGIPFLLYTMRICSWRFGEFMCKAYMVSTSI 158
            .||:::|...:|:||||.:::|||.|:   ..|...|.| :|::. ..|.||.:.|:.:......
Zfish    58 TVIWIILAHKRMRTVTNYFLVNLAFAEASMSAFNTVINF-VYSVH-NEWYFGLYYCRFHNFFPIA 120

  Fly   159 TSFTSSIFLLIMSADRYIAVCHPISSPRYRTLHIAKVVSAIAWSTSAVLMLPVILYASTVEQEDG 223
            ..|.|...:..::.|||:|:.||:......|.  .|||..:.|..:.:|..|...|:.| :|..|
Zfish   121 AVFASIYSMTAIALDRYMAIIHPLQQRMSATQ--TKVVIGVIWILALLLAFPQYYYSDT-DQLPG 182

  Fly   224 INYSCNIMWPDAYKKHSGTTFILYTFFLGFATPLCFILSFYYLVIRKLRSVGPKPGTKS---KEK 285
             ...|.|.||:.......|.:.:....|.:..|| .::...|||:.........||..|   :|:
Zfish   183 -RVVCYIDWPEYTLLDFKTMYFVCVAVLIYFLPL-LVMGCAYLVVGLTLWASEIPGDSSDRYQEQ 245

  Fly   286 RRAHRKVTRLVLTVISVYILCWLPHWISQVALIHS-NPAQRDLSRLEILIFLLLGALVYSNSAVN 349
            ..|.|||.::::.|:..:.:||||:.:  ..|||. .|...:.:.:: .::|.:..|..|::..|
Zfish   246 LTAKRKVVKMMIVVVCTFAVCWLPYHV--YFLIHQFYPHLFEHTFIQ-QVYLTIMWLAMSSTMYN 307

  Fly   350 PILYAFLSENFRKSFFKAFTC----------------------------MNKQDINAQLQLEPSV 386
            ||:|..|::.||..|.:||.|                            .::.:.:....::|| 
Zfish   308 PIIYCCLNDRFRAGFKQAFRCCPCVPEGSYEGLELKSTRYLQTQTSLYRASRMETSVSCVMQPS- 371

  Fly   387 FTKQGSKKRGGSKRLLTSNPQIPPLLPLNAGNNNSSTTTSSTTTAEKTGT 436
              :.|.|...||.|.....|....  |.....:|.|::.|.:.|..:|.:
Zfish   372 --EDGHKVTFGSVRGAAVKPAARS--PSREFTSNGSSSRSISKTVSETSS 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 82/296 (28%)
TM helix 1 79..105 CDD:320222 8/29 (28%)
TM helix 2 112..138 CDD:320222 10/28 (36%)
TM helix 3 149..179 CDD:320222 7/29 (24%)
TM helix 4 191..213 CDD:320222 6/21 (29%)
TM helix 5 241..270 CDD:320222 7/28 (25%)
TM helix 6 287..317 CDD:320222 9/29 (31%)
TM helix 7 332..357 CDD:320222 7/24 (29%)
tacr1aNP_001257407.1 7tmA_NK1R 39..322 CDD:320668 82/292 (28%)
TM helix 1 40..66 CDD:320668 7/25 (28%)
TM helix 2 73..99 CDD:320668 9/26 (35%)
TM helix 3 111..141 CDD:320668 7/29 (24%)
TM helix 4 152..173 CDD:320668 6/22 (27%)
TM helix 5 199..228 CDD:320668 7/29 (24%)
TM helix 6 247..277 CDD:320668 10/31 (32%)
TM helix 7 290..315 CDD:320668 7/25 (28%)

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