DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and gpr34b

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001122018.1 Gene:gpr34b / 791765 ZFINID:ZDB-GENE-040823-1 Length:359 Species:Danio rerio


Alignment Length:338 Identity:78/338 - (23%)
Similarity:137/338 - (40%) Gaps:57/338 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGI 198
            |...|..|..|::...:.|.|..:.|..||.|.::|.:|....:....|:::|||:||...:|.:
Zfish    19 PQNCYMDNTSLRIPLAVFYTLFFLFGFAGNLLALWVFLRLHPKKNSVRIFLINLALADILLVICL 83

  Fly   199 PF-LLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFV-- 260
            || :.|......|...:.:|:.......:..:.|...|..:|.|||:.. |..||.|:   |:  
Zfish    84 PFRVAYHFNNNQWVLPSLLCRIVGNVFYMNMYISIALLGFISVDRYLKF-HRASSRRW---FLQS 144

  Fly   261 --SKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVS---------CNIEWPDTQNSHTDSTFILY 314
              |.:|....|..|:..:.|.|     |::.|.|.:         |:.:|....|      |::.
Zfish   145 HWSAIVCGVLWAVSIAGVSPFI-----VKTENNNETHQCFQYKKLCDSKWKAYFN------FVIV 198

  Fly   315 SLVLGFATPLTFILVFYCLVI------RKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWL 373
            ::         |.:|:..||:      .||.|.............:.|.......|:..:..|:.
Zfish   199 AI---------FWVVYGALVMSYGRIGMKLITASRDKPDFPNAAKYNKTAWKSFFVLFTFTVCYA 254

  Fly   374 PHWISQVALISS--APQRCASRLEL------AVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMK 430
            |:...::..|.|  ||....:::.:      .|.|    ||..||.::|::|..|..:.:|..:|
Zfish   255 PYHFVRIFYIMSQMAPNVSCNKMNVLDKTNEVVLL----LSALNSCLDPVMYFLLCSSIRKVTLK 315

  Fly   431 -ACTCAARKDVNA 442
             .|.|..::..||
Zfish   316 FICNCFCQQTNNA 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 51/235 (22%)
7tm_1 162..417 CDD:278431 63/282 (22%)
gpr34bNP_001122018.1 7tm_1 47..302 CDD:278431 63/282 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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