DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and Gpr17

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001065245.1 Gene:Gpr17 / 767613 RGDID:1589785 Length:339 Species:Rattus norvegicus


Alignment Length:318 Identity:85/318 - (26%)
Similarity:148/318 - (46%) Gaps:53/318 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 CSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIAD-ECFLIGIP 199
            |.|..:|||..:              ||.|.:::.:...|..|..|:::::||:|| .|.|:...
  Rat    36 CFYLLDFILAFV--------------GNALALWLFIWDHKSGTPANVFLMHLAVADLSCVLVLPT 86

  Fly   200 FLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLV 264
            .|:|.....:||||...|:.......:..:.|..||..:||||::|:.||:.|.:.|.|..:.|.
  Rat    87 RLVYHFSGNHWPFGEIPCRLTGFLFYLNMYASIYFLTCISADRFLAIVHPVKSLKLRRPLYAHLA 151

  Fly   265 SAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILV 329
            .||.|:...:.|.|:::...||| :|..|.|...:.:..:.|.     |.||.:.|..|....:.
  Rat   152 CAFLWIVVAVAMAPLLVSPQTVQ-TNHTVVCLQLYREKASHHA-----LASLAVAFTFPFITTVT 210

  Fly   330 FYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVALI--------SSA 386
            .|.|:||.|.. ||    :.:|....|..:::..|::.::.|::|:.|.:...:        |.:
  Rat   211 CYLLIIRSLRQ-GP----RIEKHLKNKAVRMIAMVLAIFLICFVPYHIHRSVYVLHYRGGGTSCS 270

  Fly   387 PQRCASRLELAVFLACG-----CLSYSNSAMNPILYAFLSDNFKKSFMKACT--CAAR 437
            .||.         ||.|     ||:..|.|::|::|.|:::.|:.:.   |.  |:.|
  Rat   271 AQRA---------LALGNRITSCLTSLNGALDPVMYFFVAEKFRHAL---CNLLCSKR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 60/216 (28%)
7tm_1 162..417 CDD:278431 74/268 (28%)
Gpr17NP_001065245.1 7tmA_GPR17 32..308 CDD:320289 82/305 (27%)
TM helix 1 34..58 CDD:320289 8/35 (23%)
TM helix 2 67..88 CDD:320289 7/20 (35%)
TM helix 3 105..127 CDD:320289 3/21 (14%)
TM helix 4 150..166 CDD:320289 5/15 (33%)
TM helix 5 190..213 CDD:320289 6/27 (22%)
TM helix 6 234..256 CDD:320289 4/21 (19%)
TM helix 7 276..301 CDD:320289 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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