DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and sstr1b

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_005172275.1 Gene:sstr1b / 557645 ZFINID:ZDB-GENE-120410-2 Length:371 Species:Danio rerio


Alignment Length:422 Identity:150/422 - (35%)
Similarity:225/422 - (53%) Gaps:81/422 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NGTQNETMVTSVRPHLDHRNRPTQQNGSHYLEYDDDGPDCSYSYNFILKLITMILYALVCIIGLF 161
            ||.::..:.|.:         |....|.:  ||.:..||.|       |:|...:|||||.||:.
Zfish     8 NGNESFMLATDL---------PFNSTGDY--EYYESEPDAS-------KIIIPSIYALVCCIGVT 54

  Fly   162 GNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGIPFLLYTMQVGNWPFGNYMCKAYMVSTSI 226
            ||.:||||:::::||:|.|||||||||||||.|::.:|||..:..|.:||||:.||:..:....|
Zfish    55 GNAMVIYVILKYAKMKTATNIYILNLAIADELFMLSVPFLATSAAVHHWPFGSLMCRLVLSVDGI 119

  Fly   227 TSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNG 291
            ..|||...|.::|.||||||.|||.:.|||.|.|:|:|:...|..|:|::||:|:||.||.:.:|
Zfish   120 NMFTSIFCLTVLSVDRYIAVVHPIKAARYRRPTVAKVVNVCVWGLSLLVILPIIIFADTVPAQDG 184

  Fly   292 NVSCNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRK 356
            .|.||..||:   |.....|::|:.:|||..|:..|.:.|||::.::..||.|....:::||.:|
Zfish   185 GVDCNFMWPE---SSWSEAFVVYTFLLGFLLPVGAICLCYCLIVVRMRAVGLKAGWLQRRRSEKK 246

  Fly   357 VTKLVLTVISAYIFCWLPHWISQ-VALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFL 420
            :|::||.|::.::.||:|.:|.| :::....|....::|.:       .|||:||..|||||.|:
Zfish   247 ITRMVLLVVAVFVLCWMPFYIVQLISVFRKPPDPMVTQLFV-------ILSYANSGANPILYGFV 304

  Fly   421 SDNFKKSFMKA-----------------CTCAARKDVNAQLQLENSFFPKFGKGRQSERLLGGNG 468
            ||||::||.:.                 |..|.|:......|    .||                
Zfish   305 SDNFRRSFQRIICFRWLENGLDAEQVDYCAVALRRQTTCGQQ----DFP---------------- 349

  Fly   469 KGGAQRGALTKKKCLAT----RNNNAPMATTT 496
                       |:|||:    ||......|||
Zfish   350 -----------KECLASDMVFRNGTCTSRTTT 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 95/215 (44%)
7tm_1 162..417 CDD:278431 107/255 (42%)
sstr1bXP_005172275.1 7tm_4 47..>198 CDD:304433 77/153 (50%)
7tm_1 55..301 CDD:278431 107/255 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 229 1.000 Domainoid score I2399
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20286
Inparanoid 1 1.050 267 1.000 Inparanoid score I3008
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000463
OrthoInspector 1 1.000 - - mtm6374
orthoMCL 1 0.900 - - OOG6_107077
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3938
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.990

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