DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and AstA-R1

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster


Alignment Length:410 Identity:124/410 - (30%)
Similarity:198/410 - (48%) Gaps:28/410 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 AMTLTSLIT--PTEQLAVAPNGTTLHQLESVESESYPSINGTQNETMVTSVRPHLDHRNRPTQQN 122
            |:.|.:||:  |........||       |:.|.|    |.:.|....||  .|.||    :..|
  Fly     8 ALLLATLISSWPKASWGATGNG-------SIISVS----NSSGNNYAFTS--EHTDH----SDHN 55

  Fly   123 GSHYLEYDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNL 187
            .:..:|||.:    |.:...|:..|..:.:.::...||.||.|||.||:...:|::.||:.|:||
  Fly    56 ANDSMEYDAE----SVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINL 116

  Fly   188 AIADECFLI-GIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPIS 251
            |::|..|:| .:||......:..|||||..||.......:|...|...|::||.||::||.||::
  Fly   117 AVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVT 181

  Fly   252 SPRYRTPFVSKLVSAFAWMTSVLLMLPVILFAST-VQSSNGNVSCNIEWPDTQNSHTDSTFILYS 315
            |...||...:.|....||:|.|...:||.|..|. :...:||......:...:...:...|.:..
  Fly   182 SMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSF 246

  Fly   316 LVLGFATPLTFILVFYCLVIRKLHTVGPKHK-SKEKKRSHRKVTKLVLTVISAYIFCWLPHWISQ 379
            .:..:..|||.|...|..::.:|....|..| |.|.::..|:||::|:.|:.|:..||||  |..
  Fly   247 FLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLP--IHV 309

  Fly   380 VALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARKDVNAQL 444
            :.::.:......|.|.:.:.:....::|:||.:||||||||||||:|:|.|...|.:...:....
  Fly   310 ILVLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWCGSPPPLMTNQ 374

  Fly   445 QLENSFFPKFGKGRQSERLL 464
            |:..:.....|.|..:..:|
  Fly   375 QVTKTTRTATGNGTSNIEML 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 70/218 (32%)
7tm_1 162..417 CDD:278431 81/257 (32%)
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 53/156 (34%)
7tm_1 91..347 CDD:278431 81/257 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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