DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and TkR86C

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster


Alignment Length:540 Identity:141/540 - (26%)
Similarity:231/540 - (42%) Gaps:112/540 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SLITPTEQLAVAPNGTTL----HQLES-VESESYPSINGTQNETMVTSVRPHLDHRNRPTQQNGS 124
            |.|..||.|.   |.|.|    .:|.| |.:....|:|.|:..::::|:   :|:|:.....|  
  Fly     2 SEIVDTELLV---NCTILAVRRFELNSIVNTTLLGSLNRTEVVSLLSSI---IDNRDNLESIN-- 58

  Fly   125 HYLEYDDDGPDC-------SYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNI 182
               |..|...:|       .|...:..|.|..|::.|:..:.:.||.:|:::|.....|:||||.
  Fly    59 ---EAKDFLTECLFPSPTRPYELPWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGHRSMRTVTNY 120

  Fly   183 YILNLAIAD------ECFLIGIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSAD 241
            ::|||:|||      .| :....|:|.:    :||||:..|.......::|..||...|:.:|.|
  Fly   121 FLLNLSIADLLMSSLNC-VFNFIFMLNS----DWPFGSIYCTINNFVANVTVSTSVFTLVAISFD 180

  Fly   242 RYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFAS--TVQSSNG--NVSCNIEWPDT 302
            ||||:.||:.....|...  :::....|..|.:|..|.:|::|  |....||  ...|.:.|||.
  Fly   181 RYIAIVHPLKRRTSRRKV--RIILVLIWALSCVLSAPCLLYSSIMTKHYYNGKSRTVCFMMWPDG 243

  Fly   303 Q--NSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKL---HTVGPK-HKSKEKKRSHRKVTKLV 361
            :  .|..|..:.|..|||.:..|:..:|:.|.|:.|.|   .::|.. .:..|..:|.|||.::.
  Fly   244 RYPTSMADYAYNLIILVLTYGIPMIVMLICYSLMGRVLWGSRSIGENTDRQMESMKSKRKVVRMF 308

  Fly   362 LTVISAYIFCWLPHWI--------SQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYA 418
            :.::|.:..||||:.:        :|||         :::....::|....|:.||:.:||::|.
  Fly   309 IAIVSIFAICWLPYHLFFIYAYHNNQVA---------STKYVQHMYLGFYWLAMSNAMVNPLIYY 364

  Fly   419 FLSDNFKKSFMK--ACTCAARKDVNAQLQLENSFFPKFGKGRQSERLLGGNGKGGAQRGALTKKK 481
            :::..|:..|.:  .|.|..       |.......||       .||...|......||..|...
  Fly   365 WMNKRFRMYFQRIICCCCVG-------LTRHRFDSPK-------SRLTNKNSSNRHTRGGYTVAH 415

  Fly   482 CLATRNNNAPMATTTTTTTTTTGTDAVTCLQPPVHQVPAEIQVGNPATVLVVN-----------A 535
            .|.   |::|     .||.|.....|.|..||            .|.|.|:::           |
  Fly   416 SLP---NSSP-----PTTQTLLAVLAQTLTQP------------KPQTQLLLSHHSPHPTQPSAA 460

  Fly   536 ET-NNCKPPVLHTDLXDRAP 554
            || :..|...:.|.: .:||
  Fly   461 ETKSQWKRSTMETQI-QQAP 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 86/305 (28%)
TM helix 1 147..173 CDD:320222 7/25 (28%)
TM helix 2 180..206 CDD:320222 11/31 (35%)
TM helix 3 217..247 CDD:320222 11/29 (38%)
TM helix 4 259..281 CDD:320222 4/21 (19%)
TM helix 5 308..337 CDD:320222 9/28 (32%)
TM helix 6 352..382 CDD:320222 11/37 (30%)
TM helix 7 396..421 CDD:320222 7/24 (29%)
TkR86CNP_001097741.1 7tmA_TACR 84..374 CDD:320512 86/305 (28%)
TM helix 1 85..111 CDD:320512 7/25 (28%)
TM helix 2 118..144 CDD:320512 9/26 (35%)
TM helix 3 156..186 CDD:320512 11/29 (38%)
TM helix 4 197..218 CDD:320512 4/22 (18%)
TM helix 5 251..280 CDD:320512 9/28 (32%)
TM helix 6 299..329 CDD:320512 9/29 (31%)
TM helix 7 342..367 CDD:320512 7/24 (29%)

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