DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and CXCR2

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001161770.1 Gene:CXCR2 / 3579 HGNCID:6027 Length:360 Species:Homo sapiens


Alignment Length:333 Identity:98/333 - (29%)
Similarity:163/333 - (48%) Gaps:57/333 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GPDCS-YSYN-----FIL-------------KLITMILYALVCIIGLFGNTLVIYVVMRFSKMQT 178
            |.|.| |||:     |:|             |...:|:||||.::.|.||:||:.|::.....::
Human    17 GEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFLLSLLGNSLVMLVILYSRVGRS 81

  Fly   179 VTNIYILNLAIADECFLIGIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRY 243
            ||::|:||||:||..|.:.:| :....:|..|.||.::||...:...:..::..:.|..:|.|||
Human    82 VTDVYLLNLALADLLFALTLP-IWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRY 145

  Fly   244 IAVCH---PISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNS 305
            :|:.|   .::..||...|:...:    |..|:||.|||:||..||.|||.:.:|   :.|..|:
Human   146 LAIVHATRTLTQKRYLVKFICLSI----WGLSLLLALPVLLFRRTVYSSNVSPAC---YEDMGNN 203

  Fly   306 HTDSTFILYSL--VLGFATPLTFILVFYCLVIR---KLHTVGPKHKSKEKKRSHRKVTKLVLTVI 365
            ..:...:|..|  ..||..||..:|..|...:|   |.| :|.||::          .:::..|:
Human   204 TANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAH-MGQKHRA----------MRVIFAVV 257

  Fly   366 SAYIFCWLPHWISQVALISSAPQR-------CASRLELAVFL-ACGCLSYSNSAMNPILYAFLSD 422
            ..::.||||:   .:.|::....|       |..|..:...| |...|...:|.:||::|||:..
Human   258 LIFLLCWLPY---NLVLLADTLMRTQVIQETCERRNHIDRALDATEILGILHSCLNPLIYAFIGQ 319

  Fly   423 NFKKSFMK 430
            .|:...:|
Human   320 KFRHGLLK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 65/223 (29%)
7tm_1 162..417 CDD:278431 78/270 (29%)
CXCR2NP_001161770.1 7tmA_CXCR1_2 49..325 CDD:341333 88/297 (30%)
TM helix 1 51..75 CDD:341333 11/23 (48%)
TM helix 2 84..105 CDD:341333 9/21 (43%)
TM helix 3 120..142 CDD:341333 2/21 (10%)
TM helix 4 164..180 CDD:341333 6/19 (32%)
TM helix 5 209..232 CDD:341333 7/22 (32%)
TM helix 6 250..272 CDD:341333 5/24 (21%)
TM helix 7 293..318 CDD:341333 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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