DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and gpr34a

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001007216.1 Gene:gpr34a / 335288 ZFINID:ZDB-GENE-030131-7228 Length:389 Species:Danio rerio


Alignment Length:463 Identity:104/463 - (22%)
Similarity:174/463 - (37%) Gaps:127/463 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 NRPTQQNGSHYLEYDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVT 180
            ||....|.|..||.:            .|:|...:||:|:.:.||.||.|.::|.:...:.:...
Zfish    16 NRSMWSNRSCPLEEE------------ALRLPLAVLYSLIFLFGLLGNLLALWVFLFLHRRRNSV 68

  Fly   181 NIYILNLAIADECFLIGIPFLLYTMQVGN-WPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYI 244
            .::::|:|:||...|..:||.:....:|| |..|..||:.......:..:.|...|.::|.|||:
Zfish    69 RVFLINVALADLVLLACLPFRVLYHALGNVWTLGPRMCRVVGNLFYMNMYVSITLLGLISLDRYL 133

  Fly   245 AVCHPISSPRY-RTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSHTD 308
            .:.......|: |....|.:.....|..|||:.:|::..|      .||......:...|..|..
Zfish   134 KIMGSHRGRRWLRGRSWSLVTCGLLWGLSVLMAVPMMALA------EGNEEPGKCYQYKQRKHAR 192

  Fly   309 STFILYSLVLGFATPLTFI--LVFYCLVIRKLHTVGPKHKSKEK---------KRSHRK--VTKL 360
            .. ..::||:.....|.|:  ||.|..:.|:|     ...|::|         .|:.||  |..|
Zfish   193 GK-AYFNLVMVAVFWLVFVVLLVSYGQIARRL-----LRASQDKPHLPNAARYARTARKSFVVPL 251

  Fly   361 VLTVISAYIFCWLPHW-------ISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYA 418
            :.||      |::|:.       .||:..||...:|...|...||.|    ||..||.::|::|.
Zfish   252 LFTV------CFVPYHAFRGFYVASQLQDISCETRRLMDRTNEAVLL----LSALNSCLDPVMYF 306

  Fly   419 FLSDNFKKSFMKACTCAARKDVNAQLQLENSFFPKFGKGRQSERLLGGNGKGGAQRGALTKKKCL 483
            .||.:.:::.::|..                                               :||
Zfish   307 LLSGSVRRATLQALA-----------------------------------------------QCL 324

  Fly   484 ATRNNNAPMATTTTTT----------TTTTGTDAVTCLQPPVHQVPAEIQVGNPATVLVVNAETN 538
              |.:..|.||.::||          :||...|...|            .:||..|:...:.:.:
Zfish   325 --RLHAEPPATNSSTTELRRTSVSHASTTAVLDTSRC------------SLGNITTLRSQHTDLH 375

  Fly   539 NCKPPVLH 546
            ....|.:|
Zfish   376 PHSEPCVH 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 56/230 (24%)
7tm_1 162..417 CDD:278431 70/276 (25%)
gpr34aNP_001007216.1 7tm_1 56..305 CDD:278431 67/270 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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