DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and CXCR3

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001136269.1 Gene:CXCR3 / 2833 HGNCID:4540 Length:415 Species:Homo sapiens


Alignment Length:430 Identity:103/430 - (23%)
Similarity:176/430 - (40%) Gaps:76/430 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGGRLGGKAIMEGHSTPNGAAASHRNNSTRTNIATNGCAHSGILLFVLTAMTLTSLIT-PTEQLA 74
            |.|||.|..|        |.||..::.:...:|               |...|..|.| |:... 
Human     7 GPGRLAGTVI--------GGAAQSKSQTKSDSI---------------TKEFLPGLYTAPSSPF- 47

  Fly    75 VAPNGTTLHQLESVESESYPSINGTQNETMVTSVRPHLDHRNRPTQQNGSHYLEYDDD----GPD 135
             .|:..:.||:          :|..:...::.:.....|            |.|.:.|    .|.
Human    48 -PPSQVSDHQV----------LNDAEVAALLENFSSSYD------------YGENESDSCCTSPP 89

  Fly   136 C--SYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGI 198
            |  .:|.||. :.....||:|:.::||.||..|..|::......:.|:.::|:||:||...::.:
Human    90 CPQDFSLNFD-RAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTL 153

  Fly   199 PFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKL 263
            |.......| .|.||:.:||......:|..:..::.|..:|.|||:.:.|.....|...|....|
Human   154 PLWAVDAAV-QWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTL 217

  Fly   264 VSAFAWMTSVLLMLPVILFASTVQSSNGNVS-CNIEWPDTQNSHTDSTFILYSLVLGFATPLTFI 327
            .....|...:|..||..:|.|.......|.: |...:|....    :...:..||.||..||  :
Human   218 TCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGR----TALRVLQLVAGFLLPL--L 276

  Fly   328 LVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWLP-HWISQVAL---ISSAPQ 388
            ::.||..    |.:.....|:.::|  .:..:||:.|:.|:..||.| |.:..|.:   :.:..:
Human   277 VMAYCYA----HILAVLLVSRGQRR--LRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALAR 335

  Fly   389 RCA--SRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKK 426
            .|.  ||:::|..:..| |.|.:..:||:||||:...|::
Human   336 NCGRESRVDVAKSVTSG-LGYMHCCLNPLLYAFVGVKFRE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 53/216 (25%)
7tm_1 162..417 CDD:278431 65/261 (25%)
CXCR3NP_001136269.1 7tmA_CXCR3 101..376 CDD:341335 75/288 (26%)
TM helix 1 101..128 CDD:341335 9/26 (35%)
TM helix 2 135..160 CDD:341335 7/24 (29%)
TM helix 3 171..201 CDD:341335 8/29 (28%)
TM helix 4 213..235 CDD:341335 5/21 (24%)
TM helix 5 259..288 CDD:341335 9/38 (24%)
TM helix 6 295..325 CDD:341335 9/31 (29%)
TM helix 7 344..369 CDD:341335 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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