DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and Gpr1

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001343974.1 Gene:Gpr1 / 241070 MGIID:2385324 Length:353 Species:Mus musculus


Alignment Length:376 Identity:113/376 - (30%)
Similarity:187/376 - (49%) Gaps:55/376 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NGSHYLEY--DDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYI 184
            |.|:.|:|  .:..|: ...|..::..|::.||||..::|:.||.:||: :|.|...:|||.::.
Mouse    14 NYSYALDYYSQESDPE-EKVYLGLVHWISLFLYALAFVLGIPGNAIVIW-LMGFKWKKTVTTLWF 76

  Fly   185 LNLAIADECFLIGIP-FLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCH 248
            |||||||..|::.:| ::.|.....:||||.::||.......:..|:|..||.::|.||||.:.|
Mouse    77 LNLAIADFIFVLFLPLYISYVALSFHWPFGLWLCKVNSFIAQLNMFSSVFFLTVISLDRYIHLLH 141

  Fly   249 PISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPD---TQNSHTDST 310
            |..|.|:||...|.:|....|:.:.||..|.:.|..|::.:| ::.|...:.:   |...|...|
Mouse   142 PGLSHRHRTLKSSLVVVILVWLLASLLGGPTLYFRDTMEVNN-HIICYNNFQEHELTLMRHHVLT 205

  Fly   311 FILYSLVLGFATP-LTFILVFYCLVIRKLHTVGPKHKSKEKKRS---HRKVTKLVLTVISAYIFC 371
            ::.:  :.|:..| ||....:.||:.            |.|||:   .||...::|:|:.|::.|
Mouse   206 WVKF--LFGYLFPLLTMSSCYLCLIF------------KMKKRNILISRKHLWMILSVVIAFLVC 256

  Fly   372 WLPHWISQVALIS----SAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKAC 432
            |.|:.:..:..:|    |:.|..   |:..:.|:.| |::.||.:|||||..:|..|:..|.   
Mouse   257 WTPYHLFSIWELSIHHNSSFQNV---LQGGIPLSTG-LAFLNSCLNPILYVLISKTFQARFR--- 314

  Fly   433 TCAARKDVNAQLQLENSFFPKFGKGRQSERLLGGNGKGGAQRGALTKKKCL 483
              |:..:|     |:.|.:.....|..||:|          |.|.||...|
Mouse   315 --ASVAEV-----LKRSLWEASCSGTVSEQL----------RSAETKSLSL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 69/223 (31%)
7tm_1 162..417 CDD:278431 83/266 (31%)
Gpr1NP_001343974.1 7tmA_GPR1 39..313 CDD:320247 93/293 (32%)
TM helix 1 40..66 CDD:320247 11/26 (42%)
TM helix 2 72..97 CDD:320247 10/24 (42%)
TM helix 3 110..140 CDD:320247 11/29 (38%)
TM helix 4 152..172 CDD:320247 5/19 (26%)
TM helix 5 201..226 CDD:320247 6/26 (23%)
TM helix 6 237..267 CDD:320247 8/29 (28%)
TM helix 7 281..306 CDD:320247 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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