DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and Sstr4

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_033245.2 Gene:Sstr4 / 20608 MGIID:105372 Length:385 Species:Mus musculus


Alignment Length:383 Identity:128/383 - (33%)
Similarity:207/383 - (54%) Gaps:67/383 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 LYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGIPFLLYTMQVGNWPFGNY 215
            :|||||::||.||.|||:|::|::||:|.||||:||||:|||.|::.:||:.....:.:||||..
Mouse    50 IYALVCLVGLVGNALVIFVILRYAKMKTATNIYLLNLAVADELFMLSVPFVASAAALRHWPFGAV 114

  Fly   216 MCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVI 280
            :|:|.:....:..|||...|.::|.|||:||.||:.:..||.|.|:||::...|:.|:|:.||:.
Mouse   115 LCRAVLSVDGLNMFTSVFCLTVLSVDRYVAVVHPLRAATYRRPSVAKLINLGVWLASLLVTLPIA 179

  Fly   281 LFASTVQSSNGN-VSCNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHTVGPK 344
            :||.|..:..|. |:||:.||....|   :.|::|:.:|||..|:..|.:.|.|::.|:..|..:
Mouse   180 VFADTRPARGGEAVACNLHWPHPAWS---AVFVIYTFLLGFLLPVLAIGLCYLLIVGKMRAVALR 241

  Fly   345 HKSKEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVALISSAPQRCASRLELAVFLACGCLSYSN 409
            ...::::||.:|:|:|||.|::.::.||:|.::.|:..:      ..:.|:..|......|||:|
Mouse   242 AGWQQRRRSEKKITRLVLMVVTVFVLCWMPFYVVQLLNL------FVTSLDATVNHVSLILSYAN 300

  Fly   410 SAMNPILYAFLSDNFKKSF-----MKACTCAARKDVNAQLQLENSFFPKFGKGRQSERLLGGNGK 469
            |..|||||.||||||::||     ::.|.            ||.:                    
Mouse   301 SCANPILYGFLSDNFRRSFQRVLCLRCCL------------LETT-------------------- 333

  Fly   470 GGAQRGALTKKKCLATRNNNAPMATTTTTTTTTTGTDAVTCLQPPV--HQVPAEIQVG 525
            |||:               ..|:....|...:..|..   |:.||:  .|.|.:.:.|
Mouse   334 GGAE---------------EEPLDYYATALKSRGGAG---CICPPLPCQQEPVQAEPG 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 85/216 (39%)
7tm_1 162..417 CDD:278431 96/255 (38%)
Sstr4NP_033245.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
7tmA_SSTR4 45..319 CDD:320639 111/277 (40%)
TM helix 1 46..72 CDD:320639 13/21 (62%)
TM helix 2 79..105 CDD:320639 14/25 (56%)
TM helix 3 116..146 CDD:320639 11/29 (38%)
TM helix 4 158..180 CDD:320639 8/21 (38%)
TM helix 5 205..234 CDD:320639 10/31 (32%)
TM helix 6 249..279 CDD:320639 12/29 (41%)
TM helix 7 287..312 CDD:320639 12/24 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 224 1.000 Domainoid score I2540
eggNOG 1 0.900 - - E33208_3BCR0
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20286
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000463
OrthoInspector 1 1.000 - - mtm8844
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.910

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