DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and npr-32

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_503056.4 Gene:npr-32 / 190990 WormBaseID:WBGene00013782 Length:440 Species:Caenorhabditis elegans


Alignment Length:414 Identity:117/414 - (28%)
Similarity:187/414 - (45%) Gaps:66/414 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LKLITMILYALVCIIGLFGNTLVIYVVMRF-----------SKMQTVTN---IYILNLAIADECF 194
            |||:..|.|.::.|||..||..||.:::..           .:|.:.||   ||:|.|:|.|...
 Worm    27 LKLVLAISYLVLFIIGTVGNGTVILMIINILTSMKRNVQAGKRMMSSTNHVFIYVLGLSIVDLLV 91

  Fly   195 LIGIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPF 259
            ::.:|||:..:..|.|.||..|||.|....|:....||..:.::|.|||:|||.|:.|.:.|:..
 Worm    92 ILHLPFLVVDLLKGQWLFGVAMCKVYWFGESVNKLLSSFLMTVLSWDRYMAVCSPVKSMKMRSNA 156

  Fly   260 VSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPD----------TQNS---HTDSTF 311
            .:..|.....:.:.:|:|||:..|:..:.....:...:|..:          |.:.   ..|:||
 Worm   157 TALKVLLACTIFATVLLLPVLYEAAVFKIDKMRMVPLLEGTEELAASDLAGTTMSKCMFDADATF 221

  Fly   312 ILYSLVLGFATPLTFILVFYCLVIRKL-----HTVGPKHKSKEKKRSHR--KVTKLVLTVISAYI 369
            .||:.|:|||.|...|::||..||..|     :..|.:..||....|:|  ||||.::.||..|.
 Worm   222 TLYTFVIGFAAPAFLIIIFYVQVIYALQKSSRNIRGARGISKPDGSSNRVKKVTKRIVAVILFYF 286

  Fly   370 FCWLPHW----ISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMK 430
            .||.|.|    :||..||:.:....|..   |:|.....|...|||.||:|||:::...:...:.
 Worm   287 LCWTPQWTLNIMSQFNLIAVSWMTPALS---AMFFVAHLLVCFNSAANPVLYAYINRELRSQHVM 348

  Fly   431 ACTCAARKDVN-----------AQLQLEN-------SFFPKFGKGRQS--ERLLGGNGKGGAQRG 475
            |   ..||..:           |:|.:::       :.|.|.|.....  .||  .|.:......
 Worm   349 A---MHRKRHSLGHEQQQRLNQARLSMQSRPSDASATVFSKLGDSDAGIFNRL--SNFQQNIIAS 408

  Fly   476 ALTKKKCLATRNNNAPMATTTTTT 499
            .|.:|:.:...:.|..:..|:::|
 Worm   409 ILHRKRIILVADKNIHIENTSSST 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 76/249 (31%)
7tm_1 162..417 CDD:278431 90/292 (31%)
npr-32NP_503056.4 7tm_classA_rhodopsin-like 31..339 CDD:381740 98/310 (32%)
TM helix 1 31..62 CDD:381740 9/30 (30%)
TM helix 2 75..99 CDD:381740 9/23 (39%)
TM helix 3 115..137 CDD:381740 5/21 (24%)
TM helix 4 160..176 CDD:381740 3/15 (20%)
TM helix 5 219..242 CDD:381740 11/22 (50%)
TM helix 6 272..297 CDD:381740 11/24 (46%)
TM helix 7 314..339 CDD:381740 11/27 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCR0
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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