DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and npr-30

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001367700.1 Gene:npr-30 / 186719 WormBaseID:WBGene00019183 Length:396 Species:Caenorhabditis elegans


Alignment Length:329 Identity:69/329 - (20%)
Similarity:125/329 - (37%) Gaps:68/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 YALVCIIGLFGNTLV---IYVVMRFSKMQTVTN---IYILNLAIADECFLIGIPFLLYTMQVGNW 210
            |..|.:.|..||..|   :.:|..|.|...|..   :.||.:.:||...|:.:...::......|
 Worm    25 YITVILFGNIGNVWVSWKVGIVFVFDKSSLVPRNIVMLILFICVADLLVLLHLTLFVHFQFEKQW 89

  Fly   211 PFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAV---CHPISSPRYRT-PFVSKLVSAFAWMT 271
            .|||.:||::.....:......:.||.:|.:.|.:|   .|..|..|... ..|.:|.|..|.:.
 Worm    90 IFGNIVCKSFYCIEVVNKLIIPLALLRISRESYESVRMTSHKCSKKRRSIWNIVFQLYSVMALIA 154

  Fly   272 SVLLMLPVILFASTVQ---SSNGNVS----CNIEWPDTQNSHTDS-TFILYSLVLGFATPLTFIL 328
            ..:|.:.|::||.|..   ..:|.::    |....|     |..: .|.:.:.|.|:.......:
 Worm   155 VGVLTISVLIFAETRTYEIPRHGELTAVTMCIFHPP-----HPYAMVFNILAFVFGYGFTSAAYM 214

  Fly   329 VFYC---LVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTV---ISAYIFCWLPHW----------- 376
            .||.   :::::.::......|...:.:|:.:.|:..||   :..|:.||.|:|           
 Worm   215 YFYLRVPMILKRRYSSIKTTSSNSTRFNHQSILKIRHTVNAFVVVYMACWTPYWALFWLFFTFPP 279

  Fly   377 -------ISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTC 434
                   |||:|.:                     |.|.:.|..||:..|::...:.:.....|.
 Worm   280 SNNWMVIISQMAHL---------------------LPYISCAAYPIILTFINKGIRNAHSTIMTS 323

  Fly   435 AARK 438
            ..:|
 Worm   324 QRKK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 67/317 (21%)
TM helix 1 147..173 CDD:320222 7/23 (30%)
TM helix 2 180..206 CDD:320222 5/28 (18%)
TM helix 3 217..247 CDD:320222 7/32 (22%)
TM helix 4 259..281 CDD:320222 6/21 (29%)
TM helix 5 308..337 CDD:320222 5/32 (16%)
TM helix 6 352..382 CDD:320222 12/50 (24%)
TM helix 7 396..421 CDD:320222 6/24 (25%)
npr-30NP_001367700.1 7tm_classA_rhodopsin-like 21..310 CDD:410626 67/310 (22%)
TM helix 1 21..50 CDD:410626 7/24 (29%)
TM helix 2 57..84 CDD:410626 5/26 (19%)
TM helix 3 96..126 CDD:410626 6/29 (21%)
TM helix 4 137..164 CDD:410626 6/26 (23%)
TM helix 5 194..219 CDD:410626 5/24 (21%)
TM helix 6 246..274 CDD:410626 8/27 (30%)
TM helix 7 285..310 CDD:410626 10/45 (22%)

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