DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and npr-1

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_508816.1 Gene:npr-1 / 180752 WormBaseID:WBGene00003807 Length:457 Species:Caenorhabditis elegans


Alignment Length:460 Identity:108/460 - (23%)
Similarity:184/460 - (40%) Gaps:105/460 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECF--LI 196
            ||.|.|...|:..:|  :|..:..:|||||..:|||......:.:|.||:||||| |.:|.  ::
 Worm    17 PDPSQSIYAIVPFLT--VYLFLFFLGLFGNVTLIYVTCSHKALLSVQNIFILNLA-ASDCMMCIL 78

  Fly   197 GIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSP-RYRTPFV 260
            .:|....|....||.|||.:|........|:.|..:..|..::.||||.|..|.|:| ..|..| 
 Worm    79 SLPITPITNVYKNWYFGNLLCHLIPCIQGISIFVCTFSLGAIALDRYILVVRPHSTPLSQRGAF- 142

  Fly   261 SKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVS---CNIEWPDTQNSHTDSTFILYSLVLGFAT 322
              |.:...|:.|.::.||.......::.:...:.   |..:|   :::.:...:.:..::..|..
 Worm   143 --LTTVLLWILSFVVTLPYAFNMQMIEYTEERICGYFCTEKW---ESAKSRRAYTMIVMLAQFVV 202

  Fly   323 PLTFILVFYCLV-------------IRKL---------HTVGPKH---------------KSKEK 350
            |  |.::.:|..             |||:         ....|.|               :.|||
 Worm   203 P--FAVMAFCYANIVSVLSKRAQTKIRKMVERTSALESSCAFPSHGLEQYENELNEFLDKQEKEK 265

  Fly   351 KR---SHRKVTKLVLTVISAYIFCWLPHWISQVALISSAPQ---RCASR----LELAVFLACGCL 405
            :|   .:|:.|.:::|::..:...||||.:..:.:.....|   |...|    :...:.|....:
 Worm   266 QRVVLQNRRTTSILVTMVVWFGITWLPHNVISLIIEYDDTQSFFRLYGRDDYDISYLLNLFTHSI 330

  Fly   406 SYSNSAMNPILYAFLSDNFKKSFMKACTCAARKDVNAQLQLENSFFPKFGKGRQSERL------- 463
            :.||:.:||:|||:|:.:|::..:|.                     .||..|:|:|:       
 Worm   331 AMSNNVLNPVLYAWLNPSFRQLVIKT---------------------YFGDRRKSDRIINQTSVY 374

  Fly   464 ----------LGGNGK--GGAQRGALTKKKCLATRNNNAPMATTTTTTTTTTGTDAVTCLQPPVH 516
                      |.|..|  ||....|| |::.|.:.:.|........|.|.|..........|.:.
 Worm   375 KTKIVHDTKHLNGRAKIGGGGSHEAL-KERELNSCSENLSYHVNGHTRTPTPEVQLNEVSSPEIS 438

  Fly   517 QVPAE 521
            ::.||
 Worm   439 KLVAE 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 81/334 (24%)
TM helix 1 147..173 CDD:320222 10/25 (40%)
TM helix 2 180..206 CDD:320222 11/27 (41%)
TM helix 3 217..247 CDD:320222 8/29 (28%)
TM helix 4 259..281 CDD:320222 6/21 (29%)
TM helix 5 308..337 CDD:320222 5/41 (12%)
TM helix 6 352..382 CDD:320222 8/32 (25%)
TM helix 7 396..421 CDD:320222 8/24 (33%)
npr-1NP_508816.1 7tmA_NPYR-like 27..351 CDD:320331 81/334 (24%)
TM helix 1 28..54 CDD:320331 10/27 (37%)
TM helix 2 61..86 CDD:320331 10/25 (40%)
TM helix 3 99..129 CDD:320331 8/29 (28%)
TM helix 4 140..161 CDD:320331 6/23 (26%)
TM helix 5 188..217 CDD:320331 4/30 (13%)
TM helix 6 270..300 CDD:320331 7/29 (24%)
TM helix 7 321..346 CDD:320331 8/24 (33%)

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