DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and npr-17

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_498743.2 Gene:npr-17 / 176124 WormBaseID:WBGene00015559 Length:436 Species:Caenorhabditis elegans


Alignment Length:534 Identity:124/534 - (23%)
Similarity:198/534 - (37%) Gaps:161/534 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 ESVESESYPSINGTQNET----------MVTSVRPHLDHRNRPTQQNGSHYLEYDDDGPDCSYSY 140
            :|..::|..|.||..:.|          :|..|.|..:|.:                        
 Worm    11 DSYLNQSMNSENGLDSVTQIMYDMKKYNIVNDVLPPPNHED------------------------ 51

  Fly   141 NFILKLITM-ILYALVCIIGLFGNTLV---IYVVMRFSKMQTVTN--IYILNLAIADECFLIGIP 199
               |.::.| :.|.|:.::|..||..|   ||.|:|.|: .|:.|  ||::.|:..|....:.:|
 Worm    52 ---LHVVIMAVSYLLLFLLGTCGNVAVLTTIYHVIRSSR-ATLDNTLIYVIVLSCVDFGVCLSLP 112

  Fly   200 FLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTP----FV 260
            ..:....:|.|.||...||.:.|..:.....|::.|..||.|||..|||| ...|.|:.    .:
 Worm   113 ITVIDQILGFWMFGKIPCKLHAVFENFGKILSALILTAMSFDRYAGVCHP-QRKRLRSRNFAITI 176

  Fly   261 SKLVSAFAWMTSVLLM-----LPVILFASTVQSSNGNVS------CNIEWPDTQNSHTDSTFILY 314
            ..:::.:|::|...|:     ..:||:|.  :::.|.::      |.::    .:|...:.|.:|
 Worm   177 LLVLAVYAFITLCPLLWSFTAREIILYAK--ETAPGMLTRMKIEKCTVD----IDSQMFTAFTIY 235

  Fly   315 SLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWLPHWIS- 378
            ..:|.:.|||..|..||..::.||.......||.:....|  ::...|.|...|..||.|.|:: 
 Worm   236 QFILCYCTPLVLIAFFYTKLLSKLREHTRTFKSSQIPFLH--ISLYTLAVACFYFLCWTPFWMAT 298

  Fly   379 --QVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARKDVN 441
              .|.|.:||.......:.:.:......|.::|||:|.|||..|                    |
 Worm   299 LFAVYLENSANSSSVPPVFVYIMYFIHALPFTNSAINWILYGAL--------------------N 343

  Fly   442 AQLQLENSFFPKFGKGRQSERLLGGNGKGGAQRGALTKKKCLATRNNNAPMATTTTTTTTTTGTD 506
            .|||             |..|         :.|...|||             |||||.:|.....
 Worm   344 GQLQ-------------QRYR---------SNRSNSTKK-------------TTTTTASTALLEK 373

  Fly   507 AVTCLQPPVHQVPAEIQVGNPATVLVVNAETNNCKPPVLHTDLXDRAPSMPLETV----VFIARR 567
            .:|.|              |..:...||...|:.            |.:.|.:|:    |.:|..
 Worm   374 KITNL--------------NTNSNYQVNGSMNSI------------ATAAPTKTIGNNEVLVATS 412

  Fly   568 XDHQVELDLDTAID 581
            .     :|.|.|.|
 Worm   413 T-----IDDDVATD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 62/235 (26%)
7tm_1 162..417 CDD:278431 75/277 (27%)
npr-17NP_498743.2 7tm_4 61..>191 CDD:304433 40/131 (31%)
7tm_1 71..339 CDD:278431 75/277 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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