DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and Sstr3

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_598206.1 Gene:Sstr3 / 171044 RGDID:620308 Length:428 Species:Rattus norvegicus


Alignment Length:305 Identity:109/305 - (35%)
Similarity:184/305 - (60%) Gaps:19/305 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGIPFLLYTMQVGNW 210
            ::..::|.:||::||.||:||||||:|.:...:||::||||||:|||.|::|:|||.....:..|
  Rat    46 ILISLVYLVVCVVGLLGNSLVIYVVLRHTSSPSVTSVYILNLALADELFMLGLPFLAAQNALSYW 110

  Fly   211 PFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLL 275
            |||:.||:..|....|..|||...|.:||.|||:||.||..|.|:||..|:::|||..|:.|.::
  Rat   111 PFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARMVSAAVWVASAVV 175

  Fly   276 MLPVILFASTVQSSNGNVSCNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHT 340
            :|||::|:..   ..|..:|:::||:...:.. :.||:|:..|||..||..|.:.|.|::.|:.:
  Rat   176 VLPVVVFSGV---PRGMSTCHMQWPEPAAAWR-TAFIIYTAALGFFGPLLVICLCYLLIVVKVRS 236

  Fly   341 VGPKHKS-----------KEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVA-LISSAPQRCASR 393
            ...:.::           :.::||.|:||::|:.|::.::.||:|.::..:. ::...|:..|. 
  Rat   237 TTRRVRAPSCQWVQAPACQRRRRSERRVTRMVVAVVALFVLCWMPFYLLNIVNVVCPLPEEPAF- 300

  Fly   394 LELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARK 438
              ..::.....|.|:||..|||||.|||..||:.|.:.....:|:
  Rat   301 --FGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRILLRPSRR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 86/226 (38%)
7tm_1 162..417 CDD:278431 95/266 (36%)
Sstr3NP_598206.1 7tm_GPCRs 46..333 CDD:421689 107/293 (37%)
TM helix 1 47..73 CDD:410628 13/25 (52%)
TM helix 2 80..106 CDD:410628 15/25 (60%)
TM helix 3 117..147 CDD:410628 13/29 (45%)
TM helix 4 159..181 CDD:410628 9/21 (43%)
TM helix 5 204..233 CDD:410628 11/29 (38%)
TM helix 6 259..289 CDD:410628 10/29 (34%)
TM helix 7 301..326 CDD:410628 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..428 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 223 1.000 Domainoid score I2480
eggNOG 1 0.900 - - E33208_3BCR0
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3165
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000463
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.960

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