DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and Sstr3

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_598206.1 Gene:Sstr3 / 171044 RGDID:620308 Length:428 Species:Rattus norvegicus


Alignment Length:305 Identity:109/305 - (35%)
Similarity:184/305 - (60%) Gaps:19/305 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGIPFLLYTMQVGNW 210
            ::..::|.:||::||.||:||||||:|.:...:||::||||||:|||.|::|:|||.....:..|
  Rat    46 ILISLVYLVVCVVGLLGNSLVIYVVLRHTSSPSVTSVYILNLALADELFMLGLPFLAAQNALSYW 110

  Fly   211 PFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLL 275
            |||:.||:..|....|..|||...|.:||.|||:||.||..|.|:||..|:::|||..|:.|.::
  Rat   111 PFGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARMVSAAVWVASAVV 175

  Fly   276 MLPVILFASTVQSSNGNVSCNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHT 340
            :|||::|:..   ..|..:|:::||:...:.. :.||:|:..|||..||..|.:.|.|::.|:.:
  Rat   176 VLPVVVFSGV---PRGMSTCHMQWPEPAAAWR-TAFIIYTAALGFFGPLLVICLCYLLIVVKVRS 236

  Fly   341 VGPKHKS-----------KEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVA-LISSAPQRCASR 393
            ...:.::           :.::||.|:||::|:.|::.::.||:|.::..:. ::...|:..|. 
  Rat   237 TTRRVRAPSCQWVQAPACQRRRRSERRVTRMVVAVVALFVLCWMPFYLLNIVNVVCPLPEEPAF- 300

  Fly   394 LELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARK 438
              ..::.....|.|:||..|||||.|||..||:.|.:.....:|:
  Rat   301 --FGLYFLVVALPYANSCANPILYGFLSYRFKQGFRRILLRPSRR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 107/293 (37%)
TM helix 1 147..173 CDD:320222 13/25 (52%)
TM helix 2 180..206 CDD:320222 15/25 (60%)
TM helix 3 217..247 CDD:320222 13/29 (45%)
TM helix 4 259..281 CDD:320222 9/21 (43%)
TM helix 5 308..337 CDD:320222 11/28 (39%)
TM helix 6 352..382 CDD:320222 10/30 (33%)
TM helix 7 396..421 CDD:320222 10/24 (42%)
Sstr3NP_598206.1 7tm_GPCRs 46..333 CDD:475119 107/293 (37%)
TM helix 1 48..72 CDD:410628 13/23 (57%)
TM helix 2 81..102 CDD:410628 13/20 (65%)
TM helix 3 118..140 CDD:410628 7/21 (33%)
TM helix 4 163..179 CDD:410628 6/15 (40%)
TM helix 5 205..228 CDD:410628 9/22 (41%)
TM helix 6 265..287 CDD:410628 6/21 (29%)
TM helix 7 301..326 CDD:410628 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..428 0/1 (0%)

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