DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and Ptgdr2

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_034092.1 Gene:Ptgdr2 / 14764 MGIID:1330275 Length:382 Species:Mus musculus


Alignment Length:420 Identity:104/420 - (24%)
Similarity:172/420 - (40%) Gaps:99/420 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 PTQQNGSHYLEYDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVV---MRFSKMQTV 179
            |...|.|  |.|.|.              ::::|:.|..::||..|.|:::||   ||    |||
Mouse    20 PNHSNSS--LRYIDH--------------VSVLLHGLASLLGLVENGLILFVVGCRMR----QTV 64

  Fly   180 TNIYILNLAIADECFLIGIPFLLYTMQVG-NWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRY 243
            ...::|:||::|......:||..|.:.|| :|..|...||.:.....:..|.|...|..:|.||.
Mouse    65 VTTWVLHLALSDLLAAASLPFFTYFLAVGHSWELGTTFCKLHSSVFFLNMFASGFLLSAISLDRC 129

  Fly   244 IAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCN---IEW-----P 300
            :.|..|:.:..:||..|:..|....|..:||..:|..:|..|:...:|.:.|.   :.|     .
Mouse   130 LQVVRPVWAQNHRTVAVAHRVCLMLWALAVLNTIPYFVFRDTIPRLDGRIMCYYNLLLWNPGPDR 194

  Fly   301 DTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVI 365
            ||...:......:...:|.|..||..|...:..|..:||     |:.::  |:.|.| :||..::
Mouse   195 DTTCDYRQKALAVSKFLLAFMVPLAIIASSHVAVSLRLH-----HRGRQ--RTGRFV-RLVAAIV 251

  Fly   366 SAYIFCWLPHWISQVALISSAPQRCASRLELA----VFLACGCLSYSNSAMNPILYAFLSDNFKK 426
            .|::.||.|:.|  .:|:.:......:..:||    .|:.  .|::.||.:||:||.|       
Mouse   252 VAFVLCWGPYHI--FSLLEARAHSVTTLRQLASRGLPFVT--SLAFFNSVVNPLLYVF------- 305

  Fly   427 SFMKACTC-----AARKDVNAQLQ---LENSFFPKFGKGRQSERLLGGNGKGGAQRGALTKKKCL 483
                  ||     ..|:.:.|.|:   :|:|                      .|.|.|      
Mouse   306 ------TCPDMLYKLRRSLRAVLESVLVEDS----------------------DQSGGL------ 336

  Fly   484 ATRNNNAPMATTTTTTTTTTGTDAVTCLQP 513
              ||.....::|.|..:|....|.:..|:|
Mouse   337 --RNRRRRASSTATPASTLLLADRIPQLRP 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 62/227 (27%)
7tm_1 162..417 CDD:278431 73/270 (27%)
Ptgdr2NP_034092.1 7tm_GPCRs 32..314 CDD:391938 82/324 (25%)
TM helix 1 34..58 CDD:341315 8/23 (35%)
TM helix 2 66..87 CDD:341315 6/20 (30%)
TM helix 3 104..126 CDD:341315 4/21 (19%)
TM helix 4 149..165 CDD:341315 4/15 (27%)
TM helix 5 203..226 CDD:341315 5/22 (23%)
TM helix 6 241..266 CDD:341315 9/27 (33%)
TM helix 7 282..307 CDD:341315 9/39 (23%)
Involved in the recycling of CRTH2. /evidence=ECO:0000250 329..332 1/24 (4%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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