DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and LOC100535160

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_003201711.2 Gene:LOC100535160 / 100535160 -ID:- Length:351 Species:Danio rerio


Alignment Length:360 Identity:101/360 - (28%)
Similarity:172/360 - (47%) Gaps:57/360 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 QNGSHYLEYDDDGPDCSYSYNFILKLITMILYALV---CIIGLFGNTLVIYVVMRFSKMQTVTNI 182
            :||:...|.....|...| ||.:....|.||.|.:   |..||.||.||:..::|.:| :||.::
Zfish    20 ENGTCANETTAGHPADEY-YNIVHVTETKILPAFIGFLCSTGLVGNVLVLVTILRSAK-KTVPDV 82

  Fly   183 YILNLAIADECFLIGIPFLLYT-MQVGNWPFGNYMCKAYMVSTSITSFTS------SIFLLIMSA 240
            |:.|||:||...:|.:|||::. .:.|:|.||:.:|      |.|||..:      :..:..||.
Zfish    83 YVGNLAVADLVHVIVMPFLIHQWARGGHWVFGSSLC------TIITSLDNCNQVACAAVMTAMSL 141

  Fly   241 DRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIE------- 298
            |||:|:.||......||...:..::.|.|..|.:::||..:.|..::..:|..||::.       
Zfish   142 DRYLALVHPFRLLSLRTRSRTIRINLFVWAASFIMVLPAWVHAKVIRFRDGLESCSLNLVSPKQV 206

  Fly   299 -WPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHR------- 355
             |           :.||..|..|..||..||..|.|::  .:|   ....::.|::||       
Zfish   207 LW-----------YTLYQTVTSFFLPLPLILTCYILIL--CYT---WRMYRKNKKAHRYNTSLPR 255

  Fly   356 ----KVTKLVLTVISAYIFCWLPHWISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPIL 416
                ::||:||.:::.::....|:.|.|  |::.:..|.:.......:|:. ||||:.|::||.:
Zfish   256 ERVVRLTKMVLVLVAVFLVSVGPYHILQ--LVNLSVPRPSLAYHTCYYLSV-CLSYAASSINPFI 317

  Fly   417 YAFLSDNFKKSFMKACTCAARKDVNAQLQLENSFF 451
            |..||.:|:...:...| .:...|..::|...|.|
Zfish   318 YILLSGHFRHRLVCRDT-PSMPSVEREIQAPRSSF 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 68/241 (28%)
7tm_1 162..417 CDD:278431 78/280 (28%)
LOC100535160XP_003201711.2 7tmA_MCHR2 47..329 CDD:320461 88/307 (29%)
TM helix 1 48..74 CDD:320461 10/25 (40%)
TM helix 2 80..106 CDD:320461 10/25 (40%)
TM helix 3 118..148 CDD:320461 11/35 (31%)
TM helix 4 160..180 CDD:320461 4/19 (21%)
TM helix 5 206..235 CDD:320461 11/41 (27%)
TM helix 6 256..286 CDD:320461 8/31 (26%)
TM helix 7 297..322 CDD:320461 9/25 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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