DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and mchr1.1

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001297042.1 Gene:mchr1.1 / 100494736 XenbaseID:XB-GENE-1018311 Length:374 Species:Xenopus tropicalis


Alignment Length:305 Identity:94/305 - (30%)
Similarity:158/305 - (51%) Gaps:28/305 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 LITMILYALVCIIGLFGNTLVIYVVMRFSK-MQTVTNIYILNLAIADECFLIGIPFLLYTMQVGN 209
            ::..:::.::|::|:.||.:|||.:.:..| ...:.:|:|::|::.|..||:|:|||::.: :||
 Frog    39 VVLPVIFGIICLVGIIGNCIVIYTINKKPKGNHNIADIFIVSLSVTDLLFLLGMPFLIHQL-LGN 102

  Fly   210 --WPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTS 272
              |.||..||.......:.:.|.|:..|..||.|||:|..|||.|...||...:.||.....:.|
 Frog   103 GVWHFGATMCTIITALDANSQFASTYILTAMSVDRYLATVHPIRSSYMRTTCAAALVILLLCLCS 167

  Fly   273 VLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSHTD-STFILYSLVLGFATPLTFILVFY----- 331
            ::.::||.::...::..:||..|.|..|   |...| ..:.||...|.|..||..|.|.|     
 Frog   168 LITIIPVFMYTQLIEHPDGNAGCGIILP---NFSIDIYWYTLYQFFLAFVIPLLIICVVYIKIQK 229

  Fly   332 ---CLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVALISSAPQRCASR 393
               |:|:       |..:...:.|| :|:|:..:|:.||:..||.|::|.|:..:..........
 Frog   230 HISCVVV-------PLPQRNFRARS-KKITRTSVTICSAFFICWAPYYILQLVHLKVTNPTVVFF 286

  Fly   394 LELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARK 438
            ....|.::.|   |:||.:||.:|..|||.||:..:|| .|.|:|
 Frog   287 YAYKVAISLG---YANSCINPFIYIVLSDTFKRHLIKA-VCPAQK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 71/227 (31%)
7tm_1 162..417 CDD:278431 81/266 (30%)
mchr1.1NP_001297042.1 7tm_GPCRs 39..318 CDD:391938 89/293 (30%)
TM helix 1 41..65 CDD:341315 7/23 (30%)
TM helix 2 75..96 CDD:341315 9/20 (45%)
TM helix 3 113..135 CDD:341315 4/21 (19%)
TM helix 4 158..174 CDD:341315 3/15 (20%)
TM helix 5 202..225 CDD:341315 8/22 (36%)
TM helix 6 248..273 CDD:341315 9/24 (38%)
TM helix 7 286..311 CDD:341315 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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