DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and mchr2

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001297035.1 Gene:mchr2 / 100490064 XenbaseID:XB-GENE-981280 Length:342 Species:Xenopus tropicalis


Alignment Length:331 Identity:100/331 - (30%)
Similarity:162/331 - (48%) Gaps:50/331 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 TMIL---YALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIGIPFLLYT-MQVG 208
            |:||   ..::|..||.||.||:..::| |:.:|:.:|||.|||:||...:||:|||::. .:.|
 Frog    34 TVILPSFIGIICSTGLVGNILVLITIIR-SRRKTIPDIYICNLAVADLVHIIGMPFLIHQWARGG 97

  Fly   209 NWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKL--VSAFAWMT 271
            .|.||:.:|.......:...|..:..:..||.|||:|:..|......||  :||.  |:...|..
 Frog    98 EWVFGSPLCTIITSLDTCNQFACTAIMTAMSLDRYMALVQPFRLTSLRT--ISKTIRVNVLLWAA 160

  Fly   272 SVLLMLPVILFASTVQSSNGNVSC--------NIEWPDTQNSHTDSTFILYSLVLGFATPLTFIL 328
            |.:::.||.:::..:|..:|..||        ::.|           :.||..:..|..||..||
 Frog   161 SFIVVFPVWVYSKVIQFKDGLESCAFDLTTPNDVLW-----------YTLYLTITTFFFPLPLIL 214

  Fly   329 VFYCLVIRKLHTVGPKHKSKEKKRSHR--------KVTKLVLTVISAYIFCWLPHWISQVA-LIS 384
            ..|.|::  .:|....|::|...|.:.        ::||:||.::..||....|:.:.|:. |..
 Frog   215 ACYILIL--CYTWEMYHQNKSAGRYNNSIPRQRVLRLTKMVLVLVGVYIVSSAPYHVIQIVNLQI 277

  Fly   385 SAPQRCASRLELAVFLACG-CLSYSNSAMNPILYAFLSDNFKKSFMKACTCA----ARKDVNAQL 444
            |.|.     |...|...|. ||||::|.:||.||..||.||:|. :..||..    :.:::|...
 Frog   278 SQPS-----LTFYVSYYCSICLSYASSGINPFLYVLLSGNFRKR-LSDCTKTKIRMSERELNYID 336

  Fly   445 QLENSF 450
            .|::||
 Frog   337 TLKSSF 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 94/303 (31%)
TM helix 1 147..173 CDD:320222 10/27 (37%)
TM helix 2 180..206 CDD:320222 13/26 (50%)
TM helix 3 217..247 CDD:320222 8/29 (28%)
TM helix 4 259..281 CDD:320222 7/23 (30%)
TM helix 5 308..337 CDD:320222 9/28 (32%)
TM helix 6 352..382 CDD:320222 9/38 (24%)
TM helix 7 396..421 CDD:320222 11/25 (44%)
mchr2NP_001297035.1 7tmA_MCHR2 35..317 CDD:320461 93/303 (31%)
TM helix 1 36..62 CDD:320461 10/26 (38%)
TM helix 2 68..94 CDD:320461 13/25 (52%)
TM helix 3 106..136 CDD:320461 8/29 (28%)
TM helix 4 148..168 CDD:320461 5/19 (26%)
TM helix 5 194..223 CDD:320461 10/41 (24%)
TM helix 6 244..274 CDD:320461 8/29 (28%)
TM helix 7 285..310 CDD:320461 11/24 (46%)

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