DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and LOC100489992

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_002941889.1 Gene:LOC100489992 / 100489992 XenbaseID:XB-GENE-29079991 Length:414 Species:Xenopus tropicalis


Alignment Length:313 Identity:83/313 - (26%)
Similarity:152/313 - (48%) Gaps:43/313 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECF-LIGIPFLLYTMQV 207
            ::.:.::.|:::.::.||||.||.:|||:..:|.:.|:::|:|||::|... |:..||.|.....
 Frog    71 VQALLIVAYSVIIVMSLFGNMLVCHVVMKNKRMHSATSLFIVNLAVSDIMITLLNTPFTLVRFVN 135

  Fly   208 GNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSK--LVSAFAWM 270
            ..|.||..||.........:...|::.|..::.||:..:.:|: .||..   :||  |..:|.|:
 Frog   136 STWVFGKEMCHISRFVQYCSLHVSTLTLTAIALDRHQVILNPL-KPRMS---LSKGVLCISFIWV 196

  Fly   271 TSVLLMLPVI----LFASTVQSSNGNVSCNIEWPDTQN---SHTD-STFILYSLVLGFATPLTFI 327
            .:....||..    ||....:.:.....|..::|:..:   .:.| |||:|..|:     ||..|
 Frog   197 MATCFSLPHAIYQKLFRYNYRENKVRSLCIPDFPEPSDLFWKYLDLSTFLLLYLL-----PLLII 256

  Fly   328 LVFYCLVIRKL---HTVGP-------KHKSKEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVAL 382
            .:.|..:.:||   :.:|.       .|: |.||:|    .|:::.|:..:..||.| ....|.|
 Frog   257 TIAYSRLAKKLWMRNAIGDITTEQYITHR-KNKKKS----IKMLVLVVVVFAVCWFP-LNCYVVL 315

  Fly   383 ISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFK---KSFMKAC 432
            |||    ...:.:.|::.|....:.|::..||.:|.:|:::|:   ||.:..|
 Frog   316 ISS----LGIKTKNALYFALHWFAMSSTCYNPFIYCWLNESFRLELKSLLSMC 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 81/305 (27%)
TM helix 1 147..173 CDD:320222 10/25 (40%)
TM helix 2 180..206 CDD:320222 10/26 (38%)
TM helix 3 217..247 CDD:320222 5/29 (17%)
TM helix 4 259..281 CDD:320222 7/27 (26%)
TM helix 5 308..337 CDD:320222 10/29 (34%)
TM helix 6 352..382 CDD:320222 7/29 (24%)
TM helix 7 396..421 CDD:320222 6/24 (25%)
LOC100489992XP_002941889.1 7tmA_GPR83 73..357 CDD:320511 80/302 (26%)
TM helix 1 74..100 CDD:320511 10/25 (40%)
TM helix 2 107..132 CDD:320511 10/24 (42%)
TM helix 3 145..175 CDD:320511 5/29 (17%)
TM helix 4 186..207 CDD:320511 6/20 (30%)
TM helix 5 237..266 CDD:320511 10/33 (30%)
TM helix 6 286..316 CDD:320511 10/34 (29%)
TM helix 7 325..350 CDD:320511 6/24 (25%)

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