DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and brs3

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_002932668.2 Gene:brs3 / 100488712 XenbaseID:XB-GENE-960289 Length:402 Species:Xenopus tropicalis


Alignment Length:372 Identity:108/372 - (29%)
Similarity:179/372 - (48%) Gaps:38/372 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ESYPSINGTQNETMVTSVRPHLDHRNRPTQQNGSHYLEYDDDGPDCSYSYNFILKLITMILYALV 155
            |.|.::|.|.:.  ||....||..      .|||..| |.::..|.|.... :|..|: |.||::
 Frog     3 EGYLNLNETLSS--VTKNTAHLRF------SNGSDAL-YQEESADLSPRLE-VLATIS-ITYAVI 56

  Fly   156 CIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLIG-IPFLLYTMQVGNWPFGNYMCKA 219
            ..:||.|||::|.|..:...||||.||:|.:||..|...|:. :|.......|..|.||...|| 
 Frog    57 ISVGLLGNTILIKVFFKVKSMQTVPNIFITSLAFGDLLLLLTCVPVDASRYMVDTWLFGRMGCK- 120

  Fly   220 YMVSTSITSFTSSIF-LLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFA 283
            .:....:||...|:| |.::|||||.|:..|:..........:...:|..|:.|:||..|..:|:
 Frog   121 ILSFIQLTSVGVSVFTLTVLSADRYRAIVKPLELQTSDAVLKTCGKAACVWIISMLLAAPEAVFS 185

  Fly   284 STVQSSNGNVSCNIE----WPDT----QNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLH- 339
            ...:.|:.:.:.:.:    :|.:    |.:|:...|:::.:|     ||:.|..:|.|:.:.|: 
 Frog   186 DLYEFSSPDKNTSFKACAPYPVSEKLMQETHSLMCFLVFYIV-----PLSIISAYYILIAKTLYK 245

  Fly   340 ----TVGPKHKSKEKK-RSHRKVTKLVLTVISAYIFCWLPHWISQVALISSAPQRCA---SRLEL 396
                ....:|....|: .|.::|.|.||.:::.:.|||||:.|  :.|..|.....|   |.|.|
 Frog   246 STFNMPAEEHTHARKQIESRKRVAKTVLVLVALFAFCWLPNHI--LYLYRSFTYHSAVNSSMLHL 308

  Fly   397 AVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARKDVNAQ 443
            :..:....|::|||.:||....:||.:|::.|.|...|...:.:.:|
 Frog   309 SATIFARILAFSNSCVNPFALYWLSRSFRQHFKKQVYCCPEQPLQSQ 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 88/300 (29%)
TM helix 1 147..173 CDD:320222 11/25 (44%)
TM helix 2 180..206 CDD:320222 8/26 (31%)
TM helix 3 217..247 CDD:320222 13/30 (43%)
TM helix 4 259..281 CDD:320222 6/21 (29%)
TM helix 5 308..337 CDD:320222 7/28 (25%)
TM helix 6 352..382 CDD:320222 11/29 (38%)
TM helix 7 396..421 CDD:320222 7/24 (29%)
brs3XP_002932668.2 7tm_GPCRs 47..340 CDD:475119 88/301 (29%)
TM helix 1 49..73 CDD:410628 11/24 (46%)
TM helix 2 82..104 CDD:410628 8/21 (38%)
TM helix 3 120..142 CDD:410628 6/22 (27%)
TM helix 4 165..181 CDD:410628 5/15 (33%)
TM helix 5 214..237 CDD:410628 6/27 (22%)
TM helix 6 269..291 CDD:410628 9/23 (39%)
TM helix 7 308..333 CDD:410628 7/24 (29%)

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